Fomitiporia mediterranea: FOMMEDRAFT_140264
Help
Entry
FOMMEDRAFT_140264 CDS
T03132
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fme03009
]
FOMMEDRAFT_140264
Enzymes [BR:
fme01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FOMMEDRAFT_140264
Ribosome biogenesis [BR:
fme03009
]
Eukaryotic type
90S particles
Helicases
FOMMEDRAFT_140264
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
18672484
NCBI-ProteinID:
XP_007265858
JGI:
Fomme1_140264
LinkDB
All DBs
Position
Unknown
AA seq
573 aa
AA seq
DB search
MESFQLLSRGGVQFDKKRFKADVQLFDRKYEQASEIGSEGKTRGDLPSELDFFKYTQGAA
PKRKIRQASSSHENGEASREETKRVKFDAVHKEEGPSQPRHRVTVKGTNVSDPVHTFEAL
QEKFDVSPRIIQNLKEYGYSSPTDIQSYATPIMLQGRDLAAISPTGTGKTLSYLVPIFSL
LKAPNSSSKVTVGSGVRAVILAPTRELAHQIHNECMKIAQGRKWKMVLLSKATASTLADK
AVRVKVDIIVSTPLRLVDSMQRCNLELDNVQHLVLDEADRLLDSEFLSQTQEVMNACMRE
NVQKAVFSATLPAGAEKIAMGALRNPVRIIVGLKDTPLPSITQKLVYVADESSKLPTLLQ
YLSQPYSPPIIIFTSTQPRASSLAEQLVLNSVQNVDCLHAGMSMKERQDAASRMRKGDSW
VMICTDVMARGMDFKGVQGVINFDFPRSVQSYIHRIGRTGRAGREGLSITYFTNEDAPFL
KPIANVLLQSGSTVPEWMLKLPKPSRMKRRDMGKIERGDAVTKSDRIGRMIAVKKRELIE
VSKRRKVRDNLGHVVRPGVEEDFTDPRSDDGVS
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggaatcatttcaattgctctcacggggtggggttcagttcgacaagaaacgattcaag
gcggacgtgcaactattcgatagaaaatacgaacaggcctcagaaatcggatctgaaggg
aaaacaagaggcgatctaccctcggagctggatttcttcaaatacacccaaggggctgca
ccaaaaaggaaaatacgacaagcatcctcttcgcatgagaacggcgaagcaagcagagag
gagacgaagagagttaagttcgatgctgtccataaggaggaagggccgagtcaaccgcga
caccgtgttaccgtcaaaggaacgaatgtttccgacccagtgcacacatttgaagcattg
caagagaaattcgatgtttccccacgtatcatccaaaatttgaaggagtatggatactcg
tctccaacagatatccagtcttacgctacaccaatcatgttgcagggacgtgatctagcc
gcaatttcacctacagggaccgggaagacgctatcctatctcgttcctatattttccttg
ttaaaagcacccaattcaagctcgaaagttactgtaggatcaggagtcagggctgtaatc
ctcgcaccgacgcgagaacttgcacatcagatacataacgaatgcatgaaaattgctcag
gggaggaagtggaagatggtgttacttagtaaagcaactgccagcacactcgccgacaag
gctgtgagggtcaaagttgatattattgtctccacgcctttacgactcgtcgattccatg
cagcgctgcaacttggaactcgataatgtacagcacctcgtactggatgaagcggatcga
ctccttgactcggaattcttgtctcagacgcaagaagtgatgaatgcttgtatgcgcgaa
aatgtgcaaaaggcggttttcagtgcgacactaccggcgggagcggaaaagatcgctatg
ggagcccttcgaaatccagtacggattattgttggcctcaaagacacaccattgccctcc
ataactcaaaagcttgtctatgtagccgatgaatcttcaaagcttccgaccctcctgcag
tatctctcacaaccctattcgcctcctatcataatattcacgtccacacaacctcgtgcc
tcctctctcgcggagcagcttgttttgaacagcgtccaaaacgttgactgtctgcatgct
ggaatgtccatgaaagaacgtcaggatgcggcgtcgagaatgaggaagggcgacagctgg
gttatgatttgtacggacgtcatggcacgcggtatggatttcaagggtgttcaaggagtg
atcaatttcgacttccctcgaagtgtacaaagttatattcacaggatagggcgcaccgga
cgggctggtcgagaaggattgtcgataacgtacttcactaacgaggatgcaccgttcctg
aaaccgatagccaacgtactactgcaatcgggatcgactgtgcccgaatggatgctcaag
ttgcccaagccttctagaatgaagcgacgtgacatgggtaaaatagagagaggtgatgcg
gtcactaaaagcgatcgaataggcaggatgatagcagttaagaaaagggaattaatcgaa
gtatcaaaaagacgaaaggttagagacaatctcggccatgtcgtcagacctggagttgaa
gaggacttcaccgaccctcggtccgacgatggagtatcttga
DBGET
integrated database retrieval system
