KEGG   Fomitiporia mediterranea: FOMMEDRAFT_140284
Entry
FOMMEDRAFT_140284 CDS       T03132                                 
Name
(RefSeq) AtMMH-1
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
fme  Fomitiporia mediterranea
Pathway
fme03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:fme00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    FOMMEDRAFT_140284
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fme03400]
    FOMMEDRAFT_140284
Enzymes [BR:fme01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     FOMMEDRAFT_140284
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     FOMMEDRAFT_140284
DNA repair and recombination proteins [BR:fme03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     FOMMEDRAFT_140284
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH
Other DBs
NCBI-GeneID: 18672487
NCBI-ProteinID: XP_007265879
JGI: Fomme1_140284
LinkDB
Position
Unknown
AA seq 351 aa
MPELPEVHRAANFIKTHAQGKTIIKVDANEDTIVFSGTTHEEFANAVRGRTVKDVGRYGK
VFYLDLDGDGPMPVMHFGMTGNILIKGESPLTYKEGPKKSDTLWPPRFTKCILHLENPPP
APATQIAFIDPRRLGRIRLCKEPLLEPPISLLGFDPILRMPSLDDFSKSVLKRSCPVKAL
LLDQSFSAGVGNWVADEILYHSRVHPEQRCNTLSSDQVSVLYKNTSYVCQTAISVNADAD
KFPDNWLFNHRWGKGKKKHLNPLKLPSGELATIKWLKVGGRTSAFVTELQTANASKLGSD
NRKEEADEESSLTSLSELDEISPKSRPKRARKAKRAATKPTGRKRQKTERV
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgcctgagctccctgaggttcatagagcggcaaacttcataaagactcacgcccaaggc
aagaccatcattaaagtagacgcgaacgaagacactatcgtattttcgggaacgactcac
gaagaatttgcaaacgctgttcgagggaggacagtaaaagacgtaggaagatacgggaaa
gtgttctatttagatctggatggggatggtcctatgcccgttatgcatttcggtatgact
gggaatattcttatcaagggtgagagccctcttacctacaaagagggtccaaagaagagt
gacacactctggccacctcgttttactaagtgcatcctacatcttgaaaatccacctcct
gctccggcaactcaaattgcattcattgatcctcgccgcttggggcgtattcgactttgc
aaagagccattgctggaacctccgatatcacttctgggcttcgatccaatcttgcgcatg
ccatccttggatgacttttcaaaaagtgttttaaaacgatcatgtccagtaaaggctctt
ctccttgaccaatccttcagtgcgggcgtagggaactgggtggctgacgagattctgtac
cactcacgagtccaccctgaacaaagatgcaatactttatcatccgaccaggtatctgtt
ctgtacaagaatacgtcgtatgtttgccaaacagccatttctgtaaatgcggacgcggat
aaatttccggacaactggctgttcaatcatcgctggggaaagggcaagaaaaagcacctc
aatccactcaaattaccttccggggagcttgcaaccatcaaatggctaaaagtcggtggt
cgcacgtcagcgtttgtaactgagctgcagactgcaaatgcctctaagttagggagcgat
aatcgcaaagaagaggcagacgaagaaagttcgctcacatccctttccgaactcgatgaa
atttctcctaagtcgaggcccaagcgggctcgcaaagcaaagcgggcggcgacaaagcca
actggcaggaagcgtcagaaaacggaacgcgtataa

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