Fomitiporia mediterranea: FOMMEDRAFT_140309
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Entry
FOMMEDRAFT_140309 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K13172
serine/arginine repetitive matrix protein 2
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fme03041
]
FOMMEDRAFT_140309
Spliceosome [BR:
fme03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
FOMMEDRAFT_140309
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
18672492
NCBI-ProteinID:
XP_007265912
JGI:
Fomme1_140309
LinkDB
All DBs
Position
Unknown
AA seq
1733 aa
AA seq
DB search
MENNDTQPSVASVVSSKPEGVASEAQPTGDSDKAADSASVQLREEAVSHADPGATKEDSA
QANDLVEAQSGARDTSSAETKPAGPTPTGSTQSYVPPVKRFSAVNINKKFLQKNQSSTTA
SGGSSPSSTSSKQAGVIARPAPQSAHSHSRLVTAKLTASPHSTSPGQGWSRPNSVTPPAP
SPANAAGPAKAGTLTAAAPVGGHGLPHIAPGGKIIQPQVLKQKLDGAARPAWRNVQPGTS
SSGLQVQNEFPTAAEAAQSRLLKHAEAKAATEVSDAQKQALSETADAFRGVHLDPNAHHW
DEMEEEDNDDFLGDVIEFADGRQYTIHVDGAEADQKAADDTPGNVGSEASVSKVDRFVDD
FDRSWPKSRPESGSHKDESSRFGSAAHSETSSDFPGHSPVSTRDGSQSRVLFNDRLNRME
PISGGRHGPGPQIHTHGGQGFRDGPSGSGRFHGGRLEREAPPHTSFTGSRKPHEGSWNVP
HGHELSQRDGRDMKSHSPTTYFHNEYHDRKGRSGWGQPPNGRQFPGRDPSASRSTTNGAP
SVASSDDHSSRHAPSVRDQQRGRFPSPGHTRDLDRQAPPHLAYTHSALPPERPQDAADSD
KLRQRRPSDALSQPSVGKGREPTQSQPAHSAQTQPEATSPKATAPGPGDDVEAVRRAYLA
ESAERAKKRRQQEEEERLKAQERARKKAAELEAKIAASKATEAPKDTQQSSTKPATDSTA
AAPPAANKPTEAEVLHVIEEAIGSATTSDAASNRIGEGRAKEGATTSRSSFVKTFTHEDN
NQSSVTRDGQASTQPRPPSAAVSDRAESWRSRAKPPTLPAQNSNKDISREPAESVLPAVR
AFEFQADESMEVVDFSDMGRLTGERTSQKPVPEAQSVPSGRPVASDFFNAPRATYTEQDS
WRRGGAVSHQTDPSATGNEQGRASYHESPAGPSEANAASIKGEDVANAHPNAQGHLRAPV
SPTTSTIPQHMQGYPGHQSSPGAPRFLRSPNASYREAPLSALDDTMSRIKGALDVMHSVA
EHGNKPDSKDASSSPSMHLAVPVSIPSKPSKWLPPALRPQGMAVNTRRAETFEPTHPEPP
RSPVPPDSKFTIRLPSVCRRIEPLTKRQINNYQKYFGPVRWEILSFEPPVEGMTKRNLSV
NDVLFKRPTGPFKLRKYRVVLPPSSMPSQSSAVKGSQRVVSDATPSTSASKDMVNGAFGK
ARGETSSWRSTSASARVESEVSYASSVLDVTSRSPPPELSVAPRMEFLPTVSGIANKPKP
SQKSLDVVDVAFYRDVRQQVDSSVNVPKVTFTVGSELDGPIDKSPLRKSSVLSAEGTRSS
PSALVESSTQEVKNASMPSPNLLSAPLIPSSNADSFSSSPAAITKTLNHTTVDEKAIEPQ
SDPFLQKPPATPPPQNTSSTWAKSPARVPDPEHLKAVWSQASNNDSVPTVNSLKSIADDL
TAVPFTLQEVKSEGGTPPPPPGPVAPPTRMSASEVTRAFQTVPSAPSNGMPAASLRSNQM
PSNLSSPIGPQRALKPPAIGLPPPPAMNPGAPRPPYMAYSTSMSNHSPSPPTLVYSHVMP
SGMAGSPSTSPYGQPVWMPVVQQGTQIIRAQPSSPYSPSLMPYAVPNAQNGVYPSSSMSN
PQGSPATYPSAPPSQMMVSPVMSHASTAPPQAMYSGSPMVMHVAPPGGAPQPRAYPPGAV
GLGRGSMPVQVPNPMDPRSHPPHGTPAAPVSRYPVHNPAGYTPAPPQSYVRHW
NT seq
5202 nt
NT seq
+upstream
nt +downstream
nt
atggagaacaacgacactcaaccgtccgtcgcctccgtcgtttctagcaagcccgaagga
gttgccagcgaagcccagccgacaggagactccgacaaggccgcagactcagcttctgta
caactgcgtgaggaggccgttagtcacgccgacccaggtgcgacgaaagaagattccgca
caggcgaatgatcttgtagaagcgcagtcgggcgctcgggacacctcgtccgcggaaacg
aagcctgcaggcccgactccaacgggcagtacgcagagctacgtgccaccggtaaagagg
tttagtgcagtaaacatcaataagaaattcctgcaaaagaaccagtcctcaacaacagcg
agcggtggctcttcgccaagttcgacgagcagcaaacaggctggcgttatagcgcggcct
gcacctcagtcagctcattcgcactcccggttggttacggctaagcttactgcgtcgcct
cactcgacttcgccgggacaaggatggtcgcgaccgaattctgtcacgcctcctgctcct
tcccctgcgaacgcagctggacccgcaaaggcgggaacactaactgctgctgctcccgtt
ggcggccatggtcttccacacattgcacctggaggcaagattatacaacctcaggtcctc
aaacagaagctggacggagctgcaaggccagcatggagaaatgtacaaccggggacttca
agctctggccttcaagttcagaacgaatttcctactgcagctgaggctgcacagagtcgc
cttctgaaacatgcggaagcgaaagcagctacggaagtttctgatgcgcagaagcaagca
ctgagtgaaacggctgatgcctttcgtggtgtacatttggatccaaatgcacatcattgg
gatgagatggaggaagaagataatgatgactttttgggagatgtcattgaatttgccgac
ggaaggcagtacaccattcatgtcgatggagccgaagcggatcaaaaagctgctgatgat
acgcctggcaatgtcggctccgaagcatcagtcagcaaagtagaccggtttgtggacgac
ttcgacaggagttggcccaaatctcgaccagaatctggatcgcataaggatgaatcctcg
cgtttcggtagtgctgctcactcggagacttcgtcagattttcctggccactcaccggtt
tccacacgcgatggctctcagtctcgggtactcttcaacgatcgattaaatcgcatggag
cctatttcaggcggccgacatggacctggtcctcaaatccatactcatgggggacagggc
tttagggacggtccaagtggttcaggtcgtttccacggaggtcgactagagcgagaagct
cctccgcatacttctttcacaggctcccgaaagccgcacgaaggctcgtggaatgtgccg
catggccatgaactatctcaacgagacggtcgagacatgaaatcccattctcctacgact
tacttccataatgagtatcatgatcgcaagggaagatctggctggggacaaccgcccaac
ggtcggcagttccctggcagagatccatctgcgtctcgttctaccactaacggtgccccg
tcagtagctagcagcgatgatcacagcagtagacatgcgccttctgtacgagaccaacag
cgaggacggtttccttcacctgggcatacgagggacctggatagacaagcaccaccacat
cttgcgtatactcactccgctcttcctcctgaacgacctcaggatgcagctgactctgac
aagctcagacaacgaagaccttctgatgctctttctcaacctagtgttggtaagggtcgt
gaaccaactcagtcccaacctgctcactcggcgcaaacccaacctgaggcaacgtcgccg
aaagcaactgcaccaggtcctggagatgatgtcgaggcggtgcgcagagcttaccttgcc
gaaagcgcggaacgcgcgaagaagcgtcgccagcaggaggaagaagaacggttgaaggcg
caagaacgagcgaggaagaaggcagctgaactagaagcgaagattgcagcgtccaaagct
actgaagcacctaaagacacgcagcagtcttcgacgaagcctgctacggatagtacggct
gcggctccgccggctgcgaacaaaccaacagaggccgaagttcttcacgtcatagaagaa
gccattggctcggctacgacatctgacgctgcatcgaacaggataggagaaggtcgcgcg
aaggagggcgctacgacctcgagatcatcattcgtgaagactttcacacatgaagataac
aaccagtcttcagttacacgcgacggtcaggcttcgactcaacctaggccgccttcagcc
gcagtatctgaccgggcagagtcgtggagatcgagagccaagcctcctacccttccagcg
cagaattcgaacaaagatatttctcgagaacctgctgaatcagtgctacctgctgtgcgc
gccttcgagtttcaggctgacgagagcatggaggtcgttgactttagtgatatgggtcgc
ctgactggagaacgaacatcccagaagcctgtacccgaagctcaatcggtaccttcaggt
cgacccgtcgcaagcgactttttcaatgcacctagagcgacatacacagagcaagattct
tggcgtaggggtggtgcggtttcacaccagactgatccttcggcgactgggaacgaacaa
ggtcgtgcatcctaccatgagtcgcctgcgggtccgtctgaagccaacgctgcttctatt
aaaggtgaagatgtggctaacgcgcacccgaacgctcaaggccatctaagggcacctgtg
tctcctacgactagtactattcctcagcatatgcaaggttaccctgggcatcaatcttct
ccaggtgctcctaggtttcttcgatcgccaaatgcctcctatcgggaagcacctctctcc
gctttggatgatacgatgtcacgtattaagggtgcattggacgtgatgcattctgtggct
gaacacgggaacaagcctgattcaaaggatgctagtagttcccctagcatgcatcttgca
gtcccagtatctatcccttcaaagcctagtaaatggcttccgcccgctcttcgtccgcaa
ggcatggcggtcaataccagacgcgcagagacatttgaacctactcatccggaacctcct
cggagtcctgtgcctcccgatagcaaattcacgatccgtctaccttccgtctgccgacgt
attgaaccgctgaccaagaggcaaatcaacaactaccagaagtacttcggcccggtacga
tgggagattttgtcatttgagccgcccgtggaagggatgacgaagaggaatttgtcggtg
aatgatgtattgttcaagaggcccactggtccattcaagctgaggaagtaccgagttgtt
ctacctccttcgagcatgccgtcacagtcctcggcagtaaagggttcgcagagggttgta
agtgacgcaactcccagtacatcggcttcgaaagacatggtaaatggagctttcgggaag
gcaagaggcgagacgagtagttggcggtccacctccgcaagtgcccgagtagaaagcgaa
gtgtcctatgcttcatcggtacttgatgttaccagcaggtctcctccaccggaattatcg
gtggcaccgaggatggagtttttaccgacagtctctggcattgcgaacaagccgaaacct
tcacagaaatctctagacgtggtcgatgtcgcgttctacagagacgtacgacagcaagtt
gatagcagtgttaacgtccctaaagtgactttcacggttggtagcgaacttgatggccct
atagacaaatcaccgttgcgtaaatcttctgttctttccgcagaagggacaagaagttct
cccagcgcgctcgttgaatcttctacgcaggaagtcaagaacgcctcgatgccgagtccg
aatttgctgtcggctccgttaataccgtcgagtaatgcggactcgttttcatcgtctccg
gcggcgataacgaagaccctgaatcacacgactgtcgatgaaaaggcgattgagccgcag
agtgaccctttcttacaaaagccacctgcaactccgccgccgcaaaatacgtcctcaaca
tgggcaaaatcacctgctcgagtacccgatccagagcacttaaaggccgtttggtcacaa
gcgtcgaacaacgattctgtccctacggtcaattctctaaagagcatcgcggacgacctc
actgctgttcctttcacgcttcaagaggtgaagtcggaaggagggacaccgccaccacct
ccgggtccggttgcaccacctacccgaatgtctgcttctgaggttacgagggcattccag
acagtcccgtctgcaccctccaatggcatgcctgcagcatcgttacgaagtaaccaaatg
ccctcgaatctaagctcgccaatagggccgcaacgagcgttgaagccaccggctatcggt
ttacctcctccccctgctatgaatcctggtgctcctcggccaccatacatggcctactcc
acgtcgatgagcaatcactcgccaagtcctcctaccttggtgtactcacacgtaatgcca
agtggaatggccggctctccctctacatcaccctacggacagcctgtttggatgcccgtg
gtacagcagggtacacaaataatccgagcacagccctcatcgccttacagcccgtcactt
atgccatacgccgtacctaatgcacaaaacggagtgtatccctccagcagcatgtcgaat
ccacaagggtcaccagcaacgtatccatccgcaccaccttctcaaatgatggttagccct
gtaatgtcgcatgcttcgactgctcctccgcaagctatgtactcaggcagtccaatggta
atgcacgtagctcctcccggtggtgcccctcaaccccgtgcgtatccaccgggtgcagtc
ggattaggtcgaggttcgatgccagtccaagttccaaatccaatggacccgcgttcccac
ccacctcatggcactccggcagctcccgtatcgcggtaccctgttcataatcccgccggg
tatacgcccgcccctccgcaatcatacgttcggcattggtaa
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