Fomitiporia mediterranea: FOMMEDRAFT_141063
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Entry
FOMMEDRAFT_141063 CDS
T03132
Name
(RefSeq) batten's disease protein Cln3
KO
K12389
battenin
Organism
fme
Fomitiporia mediterranea
Pathway
fme04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
FOMMEDRAFT_141063
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLN3
Prion_bPrPp
Motif
Other DBs
NCBI-GeneID:
18672572
NCBI-ProteinID:
XP_007267222
JGI:
Fomme1_141063
LinkDB
All DBs
Position
Unknown
AA seq
490 aa
AA seq
DB search
MAPEEENLLEHAPLEEDDTVEPPKHTRTLLFRLGLSFFLFGLINNVLYVIILSAALDLVP
PSTPKGIIAFCNIAPSLVAKVGWPYLLKGRIRYIRRILGCWILSTLGMIVVAGFDTLEMR
LLGISLASFSSGLGELTFLQRSTTYRPPSVGGRSVGYFASGTGAAGLVGAFIWWEMRSLG
VRTGVGISAIFPLIIPLTYFFILPRTKEFLHLSIPDSESADALASTSEYAPIPETDDLES
MEENSRFKGTLASPGKSAAVALSAQDKWELVKPLLLKYMLPLSCVYLFEYTINQGIAPTL
VYPVPAPQDHPLMSLLIHSIRDYYPLWQLVYQTTVFLSRSSISLGLPPLPGRLLSMPAIV
QFGILVILALESGVGLIPADSEGLAAGIVFVLISIEGVCGGLAYVNVFYRINQSHRHSPT
PSSSFDPSNPSNPSNSVADERLKQEHEFQIGSIGFADSSGILLASLVAMPTEVSLCKAQI
ARGKMLCGQL
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggctcccgaggaggaaaaccttttagaacacgcacctcttgaagaagacgacaccgta
gaaccgccgaaacatacccgaacacttctctttagactgggcctgtccttctttctcttc
ggtctaatcaataatgtgctgtatgtcatcattttatcagcagcacttgacctcgtccct
ccctcaaccccaaagggcatcatcgcattctgcaacatcgctccctctctcgtagcgaag
gtcggttggccctatcttttaaagggaagaataagatatatcagaaggattctgggatgc
tggattctgagcacacttggtatgattgtcgtagccgggtttgacactttggaaatgcgg
ctcttgggaattagccttgcttctttctcgtcagggctaggagagctgacgttcttacaa
cggtccacaacttatcgacccccgtctgttggagggcgcagtgtcgggtattttgcatcc
gggactggtgccgcaggcctggtgggtgcgttcatctggtgggagatgaggagtctgggc
gtgcgcacgggtgtcgggatctcagcaatattcccgctcatcataccattgacttatttc
ttcatcctcccgcgaacaaaggaattcttgcacctttccattcctgactctgagtccgcg
gatgccttagcgtcaacgtcggagtatgcaccaataccagagacagatgacttggagtct
atggaagaaaacagcagattcaagggtacactggcatctcctggcaagtctgccgctgtt
gcactctctgcgcaagataaatgggaactcgttaaacctctgttgctcaagtatatgctc
cctttatcctgtgtctatctctttgaatatacgatcaaccaaggaattgcgccaacgctc
gtatatcctgttccagcaccccaggatcatccgctgatgagccttctaatccattcaatt
cgcgattactaccccctctggcagctggtgtaccaaacaaccgtattcctttcccgctct
tccatctccttaggtcttccccctttaccaggccggttactatccatgccagctattgta
caatttggtatccttgtcatacttgcactagaatcgggtgtggggcttatccctgccgat
tccgagggcctcgccgctgggattgtttttgttctgattagcattgaaggtgtatgcggc
ggacttgcctacgtaaacgtcttctacagaataaaccaatcccatcgacactctcccact
ccttcctcttccttcgacccctctaatccttctaatccttctaattcagtcgcagacgaa
cgtctcaaacaagaacacgagttccaaatcgggtcaatcgggttcgccgactcgtcaggt
atcctccttgcctcgctagtcgcgatgcccacagaggttagtctgtgtaaagcacagatt
gcgagagggaagatgttgtgtgggcaattgtga
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