Fomitiporia mediterranea: FOMMEDRAFT_141772
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Entry
FOMMEDRAFT_141772 CDS
T03132
Name
(RefSeq) WD40 repeat-like protein
KO
K11790
denticleless
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fme04121
]
FOMMEDRAFT_141772
Ubiquitin system [BR:
fme04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
FOMMEDRAFT_141772
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_Prp19
Beta-prop_EML_2
Beta-prop_RIG_2nd
WDR55
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
WD40_RFWD3
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_DCAF12
Beta-prop_Aladin
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_WDR3_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_NUP159_NUP214
eIF2A
Motif
Other DBs
NCBI-GeneID:
18672666
NCBI-ProteinID:
XP_007268308
JGI:
Fomme1_141772
LinkDB
All DBs
Position
Unknown
AA seq
537 aa
AA seq
DB search
MASRQHSSPRQPFSDLTNDAFVTPNSPSRAKRRADDCDGVNKRIKCSDAETETKFEGGSS
EVDIDMLDVDVVRPLPRRQRPGVYGALQALRMGNPGARRFLSFPTLKTLESFVSSNKADI
FKCQSIDANSFLTPPYACAFSNASKRGQSLTLAVATEQGTVDILNTKKRQDWDPEPSRTT
LQIHNNGIFDVKWSPSDARIATASGDRTVAITDPNSSGGTALYSLNGGHFHTVKCVAWDP
ASNNLLVSGGRDGCIFLWDLRTSGAGNSEQGESDGRWKPVLSFPYAHEVVPGKAAKRGRT
SLAPKSVTSIAYLPDSSHEIVSSGSSDGILRKWDLRNPTSSPRKRSKKPSPVLPIDSAAE
DLTAVTYGEQPDGLTSTPTRRARGIASLAFGSGPSAGRVFALSNDSRIHTYNASGAAGVP
LGVPQADQAYTHRHMATNSFYVRTAVSPCGRWLASGGANGSAFLFDVGADRSDKLCMEGV
ELRGQDGEVGGVDWADGALATCADDGTVRIWRPDTERYRLCTDNPEEARWDWCWGRV
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgagacaacactccagcccaaggcaacccttttccgacttgacgaacgatgcc
ttcgtgacaccaaattccccgtcaagagcaaagcgacgagctgacgactgcgatggcgta
aataaacgtatcaaatgctcggacgcggagacagagacaaaatttgaaggaggcagcagt
gaggtggatattgacatgcttgacgtggacgttgtgcgtcctctcccgagaagacagcga
ccaggagtctatggagcattgcaggcattacggatgggcaatcctggagctcgtcgcttt
ttatcttttcctactttaaaaactttggagtcattcgtatcctcaaacaaagcagatata
ttcaaatgccaatcgatagatgctaactcgttcttgacgcctccgtacgcgtgcgcgttt
tcaaatgcttcaaagagaggtcaatctttgacacttgctgttgccaccgagcaaggcaca
gtggatattctcaacacaaagaaaagacaggactgggatccagaaccatcccggaccacc
ttgcagatccacaacaatggtatctttgacgtgaagtggagtccgtctgacgcgcgcatt
gctactgcatcgggtgatcgcaccgttgcgattacggaccctaactcttctggtggtact
gccctttattctttgaacggagggcatttccatacggtcaagtgtgttgcatgggatccg
gcgagtaacaatcttctagtcagtggaggtcgcgacggctgtatatttctttgggacctg
cgaacaagtggtgcaggaaactctgaacaaggagagtcagacgggcgatggaagcccgtt
ctgagctttccctatgcccatgaggttgttcctggcaaggcggctaagagaggacggacg
tctcttgctcctaagagcgtcacgtcaattgcgtatcttccggactcttctcatgaaatc
gtgagcagtggctcttcagatggtattcttcgtaaatgggacttgcgcaacccaacgtct
tccccgagaaaacgatccaagaaaccgagtcctgtccttccaatagattctgcggcagaa
gaccttacggcggttacatacggagaacaacctgacggcttaactagcacgccaacacgc
agggctcgaggaatcgcttctcttgccttcggttcgggacctagcgctggccgcgtattt
gctctaagcaatgattcgcgaatacatacctacaacgcctccggagctgctggcgtaccg
ctcggtgtaccacaggcagatcaggcatatacacatcgacacatggcgacaaactccttt
tacgtgcgtacggcagtgagtccctgtggtcgttggttagcaagtggaggcgcaaacggt
tcggccttcctatttgacgttggtgctgaccggtcagataagctttgtatggagggcgtt
gaattgagaggccaggatggagaagttggtggagttgactgggctgatggagcattggca
acatgtgctgatgatggaaccgtgaggatttggagacccgatactgagaggtatagatta
tgcacggataatccggaggaagccaggtgggattggtgttggggcagggtgtaa
DBGET
integrated database retrieval system