Fomitiporia mediterranea: FOMMEDRAFT_142163
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Entry
FOMMEDRAFT_142163 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K14828
pre-rRNA-processing protein RIX1
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fme03009
]
FOMMEDRAFT_142163
Ribosome biogenesis [BR:
fme03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
FOMMEDRAFT_142163
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIX1
YqfQ
Motif
Other DBs
NCBI-GeneID:
18672706
NCBI-ProteinID:
XP_007268855
JGI:
Fomme1_142163
LinkDB
All DBs
Position
Unknown
AA seq
769 aa
AA seq
DB search
MASADLLQTFLHFHLATDASSVTNLPSVISGLSSDSLETSSHSPKWINRVNALIHSREPA
ARWAGITLALQTSKLSSNVLISSAEGWVPIILPILSRNESLAVWKASIRLLAFIFTSTTN
LAEFQRQVVIPNVLKLSSALISLAEKQRNEELKVLCLNVLAVVVPLYPTLHRQLASTLST
MSLNFLNGSPSSTPGALVLSAARLHACLHVTGGKVGGVTLWRKSVDETVAFCSSALEILR
STYSLGQLAPSQSDPLISIPLNLDRLRCGVELLCHLLRVTVDRPVLVPVQSLANLCVEML
RVARKGALSNGVDPSLRCMEAAVVPDILDLGCYLTACLSNCVRNKFTPHLPRILDIIAYH
LEQPTSIKERLPLIKVIPSLLGSCLPPPEPLTSGRIIKANLPAIATLLSQKAVEESSTTG
DIGTKKGKKRARNYEGDEVFKVSRDTLCETIEDTELVVASLDALPFLLRVPNIPAYLQSL
SSRLLLSLLLALPKLSASSVARDPNIKDEVLRRVKSMCVEFASGSSAVLCKSLPLVVGAI
SDDEMTRKNVLPESSERHEFILDLMLHPRLPPLLRSLPSLDTIALCRSEEGTEERKTRES
LDLRSICEDKESEEVDELQPSTTAHETLQKTAVESSQELMCSTTDTPVPPVVIPAVPIRP
AAPLVVRPVQVEISVAPEAPRLDAVSDASHPQDASIDPDEPKLPPGPGPKGTETIPETRL
VPPAEARNTEPPSYRSTEPTRMFVDDEDEDGDIEMPVLNMESDTDSEAE
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgctgaccttctacagactttcttgcactttcatcttgccacagatgcgtct
tcagtaacgaatctgccttcggttatatctggactttcttcagacagtcttgaaacgtcg
tcccattctcccaagtggataaatcgcgtgaacgcgctcattcactccagagaacctgct
gctcgatgggctggcataacactggctttacagacatcgaaactgtccagtaatgtactc
attagttccgccgaaggctgggttccaattatccttcccatactttcgaggaatgaaagc
ctagcagtctggaaagcgtccattagactcctagcattcatattcacctcgacgacgaat
cttgcagaattccagcgacaagtagtcattcccaacgtactgaaattgagctcggcactc
atatctctcgcggaaaagcaacgcaatgaagaattgaaagtattatgtctaaacgtactc
gctgtcgtggtacctctatatcctaccttacaccgccaactagcatctacattatcgacc
atgtccctcaacttcttgaacggctcaccctcgtctacacctggagcccttgtgttaagt
gcagcaagacttcatgcctgtttacatgtcactggaggaaaagtaggaggtgtcacgttg
tggaggaagagtgtggacgagactgttgcattttgctccagtgccttggaaatactacgc
tcgacgtattcattgggccaacttgctccttctcagtcggatccactaatatctattccg
ctcaatcttgatcgtctacgatgtggagtcgagttactttgccaccttttacgcgtgaca
gttgacaggcccgtcctcgttcctgtgcagtcgcttgcaaacctgtgcgttgagatgctg
agggtcgctaggaaaggcgcactgtctaatggagttgatccatcacttcgatgcatggag
gctgcagtggtacccgacatccttgatttagggtgttatcttacggcatgcctctcaaac
tgtgtacggaacaaatttacacctcatctacctagaattttggatattatcgcataccat
ttagaacaaccaacgtctataaaggaacgtcttcctctgattaaagtcattccctccctc
ctcggctcttgtctacccccaccagaaccactgacgtccggacggataatcaaagctaac
ctaccagctattgcgactttattatctcagaaagcagtggaggagtcatcaacaacaggc
gatattggaacgaaaaaagggaagaaacgtgcccgcaattacgagggagacgaagtgttt
aaagtaagccgcgatacgctatgcgagactatcgaagatacagaacttgtagtggcttct
cttgacgctctaccatttctacttcgcgtcccgaatattccggcctacttgcaatctcta
tcctctcgcttacttctttcgctgttgcttgcgctgccaaagctatctgcatcgtctgtc
gcccgtgatccgaacatcaaagacgaggtcttacgaagagtgaaaagcatgtgtgttgaa
ttcgcgagcggctcaagcgcggtgttgtgtaagagtctaccacttgtcgttggtgcgatt
tcggacgacgaaatgactcgcaaaaatgttcttccagaatcttcagagcgacatgagttt
atcctggacctaatgcttcatcctcgtctcccacctctacttcgctctctcccttcacta
gataccattgcactgtgccgatctgaagaaggtacggaagaacggaagacgcgcgaatcg
ctggatttgcgtagcatatgtgaagataaggaatcagaagaagtggatgaattacaaccc
tcgaccacggcacatgaaactctccagaaaacggcagtagaatctagtcaagagctgatg
tgttctactacagatacgcctgtgccacctgtcgtcatccctgccgtgccgatccggcct
gctgcacctcttgttgttcggccagtgcaagttgaaatttccgttgcgccagaagctccc
agattagatgctgtatcggatgcatctcaccctcaagatgcatctatagatcctgacgaa
ccaaagcttccgccgggtcctggccccaagggaaccgaaacgatcccagaaactcggctt
gtacctcctgctgaagcgcgaaatacggagcctccgtcgtatcgctctacagaaccgact
cggatgtttgtggatgatgaagacgaagacggggacattgaaatgcctgtgttgaacatg
gagtcagataccgactcggaggcagaatag
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integrated database retrieval system
