KEGG   Fomitiporia mediterranea: FOMMEDRAFT_142415
Entry
FOMMEDRAFT_142415 CDS       T03132                                 
Name
(RefSeq) hypothetical protein
  KO
K15361  WD repeat-containing protein 48
Organism
fme  Fomitiporia mediterranea
Pathway
fme03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:fme00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    FOMMEDRAFT_142415
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fme03400]
    FOMMEDRAFT_142415
DNA repair and recombination proteins [BR:fme03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     FOMMEDRAFT_142415
SSDB
Motif
Pfam: DUF3337 WD40_Prp19 WD40 WDR55 WD40_CDC20-Fz WD40_WDHD1_1st EIF3I Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML WD40_RFWD3 NBCH_WD40 Beta-prop_IFT122_1st RAWUL WDR90_beta-prop_4th Beta-prop_DCAF12 Beta-prop_Vps41 Beta-prop_HPS5 WD40_MABP1-WDR62_1st
Other DBs
NCBI-GeneID: 18672730
NCBI-ProteinID: XP_007269353
JGI: Fomme1_142415
LinkDB
Position
Unknown
AA seq 1318 aa
MAPSSARRVSYVVPSPSTAVPKLRLPPEGTPRNGQIGPILIPSNSAAAEHHGKKSRYPRH
RLGVAAFALDTSTQFVGRDSPEGILYSGGRDGMVMMWDLGMAMKQRVPKFGSPGQDGSRR
MGRWEKLTIDEDDDNAIYEEEDDEWLTSDGDVLGDVIGSGGRRASRYWSKQFDIPYGQRW
ELDVNSVNPGQPAYWRKHVQAHTDWVNDLLLCNLNQTVVSASSDGTVKAWSPHSSAATLP
STIGTHTDYARCLSQCHERKWIASGSFDRTIKLWDMAEPRVDPLMTLVSPDAVGPKSSVY
ALASDPSGHVIAAGGPERVVRTWDPRSGKRTGKLVGHTDNIRAILMSEDSRYLLTGSADA
SIKLWSILSPQRCIYTFTHHTESVWSLFSSHPALETFYSGDRSGLVCRVDVEECQRVYQG
ECTLLCKDDGEPNMASSEGVSKIIAMDDHLVWTASGSSSIRRWRVPQSQLARAVSSSPLD
ESSRSQSLHRHTSATSTSRSPGLPDGTSVRRTRGQSLTPSISASLASRESFEFESEDNAL
NGIPYESLIKLCAPNGHHGTFSITSRSREAEVSTLYSATSAKSLTRQPRSPTSGTFPGHA
YSHPQGHVSVGTHGGSGRRDTLVPPGLDGPVVPLPNTRLAYEDRDVAPDATPLVKEPDLV
IEGEHGLVRVLIMNDRMHALTVDTTGVVAVWDIVRCQCLGVFAKEDVQNANKSATSSLAS
SGDGTNSTRDRISPRQALEIVRDRIEGEAVVNTWSNADTKIGELTIHISERCFESEIFAD
EAGYERIYSDDHRLNIGKWALRNLFMGFIREEQRLAAKHAHEKGVPSAYKGGHSQRGNSS
GHPRALSDSSVGDRVPGQFSSTADVPPVPALPSDLASGVALRLHGLSPIAQSPVGSAGSD
TLTTPKPATYVRSNLGGASVTADEATPTANPSVGLAGGASAVPTSPTATTTPSATTASAS
HDYFSLRRRPSTSQSTSTTQTAAAPAEDDFSGWGGPGSAKSSTAHETAPSTPSTPGGGLM
GRLKNLGKSARRAATEAETPSATTPYTADASETKVEGHTSSSSSHPKSAIERLKSQPITP
PSSHEAPVISLPSETAIIVSEELPSGWSPVYRGTVGCVGADAQVLEEVLPEWLLEFLLAN
KAPPVPLAKLSFVLLPAVIPPDSREIYGETLPELLNTAQSKLSASRFLRVKKLTYHVQEK
LDKNPQSKPASPRSSSDAPNTSRPSLGRGSPAYDGSSSPAASRSSTPRLSPMHLHNHGTH
LPRAEDVYEILCNDQVLSLEMTLAAVRQFVWRSSGELIMYYRRKARHSPSPVTPGIAY
NT seq 3957 nt   +upstreamnt  +downstreamnt
atggcaccatcttcagcgcggcgcgtatcttatgtcgttccctcgccgtccaccgccgtg
ccaaagttacgcttgccaccggaaggcactcctagaaatggccagataggccctatcctc
ataccctcaaacagcgctgcagcagagcaccatggaaagaagtcgcgttatccccgccat
agattgggtgtggctgcttttgccttagatacttcgacgcaattcgtcggtcgcgatagc
cccgaaggcattctctattcaggtggaagggatggcatggtaatgatgtgggatcttggc
atggcgatgaaacagcgagtacctaagtttggctcacccgggcaggacgggagccgccgt
atgggccgctgggagaagctgacgatcgacgaggacgacgataatgctatctatgaggag
gaagacgatgaatggctaacgagtgatggcgatgtgttaggagatgtcataggcagcggt
ggaaggcgagcttcacgttattggtcaaaacaattcgacattccgtatgggcaacgttgg
gagcttgatgtcaattccgtcaaccctgggcagccagcatattggagaaaacatgttcag
gctcacacggactgggtgaatgaccttctgttgtgtaatcttaaccagacagtcgtatct
gcctcgtcagatggcaccgtcaaggcttggagcccacacagctcagcggctactcttccc
tctaccataggtacccatactgactacgctcggtgcttatcacaatgtcatgaaagaaag
tggatcgcttctggttcttttgatcggactatcaaactatgggatatggctgagccacga
gttgatccattgatgacgcttgtctctccagacgcagtgggcccaaagtcttctgtgtat
gcacttgcatcggatccgtctggccatgtcattgcggcaggcgggcctgaacgcgtggta
cgcacttgggatccgcgttcgggcaagaggacaggcaaactagtgggacatacggataac
atccgcgcaattcttatgtccgaagattcgagataccttctcacaggttccgccgacgcg
tcaatcaagctgtggtccatactctctcctcaacgctgtatctacacgtttactcaccac
acagaatcggtgtggtcccttttctcttctcaccctgctctcgagacattctattctggt
gatcgttcgggtcttgtttgccgcgtcgacgtagaggagtgtcagcgcgtttaccaaggc
gaatgcacactcttatgtaaagatgacggtgaaccgaatatggcttcctcagaaggtgtt
agcaagattattgccatggatgaccatctcgtatggacagcatcaggaagctctagcata
cgcagatggagagttccccagagtcaattagctcgagcggtatctagcagcccgctcgac
gagtccagcaggtcccagtcgttgcaccgacacacttcggctactagtacgtcacgttcg
ccaggtctccccgatggcacctctgtacggcgtactagaggccaatccttaactccgtca
atttcagcatcactggcttcacgcgagtcgtttgagttcgagtccgaagacaatgctttg
aatggcattccgtatgagagcttaatcaaactctgtgcaccaaatggacaccatggaacg
ttcagcatcacctcacgaagtcgtgaagcagaagtttccacgctttattctgctacatct
gcaaaatctttaacgcgacaaccacgttctccaacctccgggacgttcccaggtcatgca
tactcacatcctcaaggccatgttagtgtgggtacacacggtggctccggacggagagat
acattggtcccacctggattagacggtccggtcgttccacttcctaacactcgcttggcc
tacgaggatcgtgacgttgctcctgatgcaactccgctcgtcaaagagccggatctagtt
atcgaaggcgagcatggccttgtccgtgttctgattatgaatgaccgcatgcacgccctg
acagtcgacacgacaggtgtagttgcagtgtgggacatcgttcgatgccagtgccttggt
gtttttgctaaggaagacgtacagaatgcaaataagagtgcgacgagcagtctggccagt
agtggtgatggtacgaactccacgagggacagaatttcaccgcgccaggcactagaaatc
gtacgggatcgtattgaaggcgaagccgtcgtgaacacgtggtcaaatgcggacacgaag
attggggaactgactatccatatctccgaaaggtgcttcgagtcagagatcttcgcggac
gaggcgggctatgaaagaatatatagcgacgatcaccgcttaaatattggaaaatgggcc
ttaagaaatttatttatgggcttcattcgcgaagagcaacgtttggcggcgaagcacgct
cacgagaaaggtgtaccgtcagcgtacaaaggtgggcattcacaacgaggcaatagctct
ggacatccgcgtgcattgtcagattcgtctgtaggcgatcgagttcctggccagttcagt
tcgacagccgatgtgccccctgtaccagctttgccatctgacctagcctcgggagtagca
cttaggttacatggtctgtcacctatcgcgcagtctcccgtaggttcggctggaagcgac
actctgacaacgccaaagccagcgacttacgtacggtcaaacttaggcggtgcatccgtt
acagctgatgaagcaactcctacggcaaacccctctgttggtcttgcagggggtgcctct
gctgttcctacatctccgactgcaacaacgacaccatctgctacaactgcctcggcaagc
catgactatttttctctccggcgtcgcccgtctacgtcgcaatcaacgtccactactcaa
acagccgcggcacctgccgaggatgacttctctggctggggtggcccaggaagcgcaaaa
agttcgacagctcacgaaactgccccttctacaccaagtactcctggaggtggtctcatg
ggtcggttaaagaacttgggaaaaagcgcgcgtagggcggcgacggaagcagagactcct
tcagcgactactccttacaccgcggatgcttctgagaccaaagtggaggggcatacctcg
tcatcatcatcacatcctaaatctgcaatcgagcggttaaagtctcagcctatcaccccg
ccttcttctcatgaagcacctgttatttcgctcccgagtgagaccgccatcattgtttcg
gaagaattaccgtcgggttggtcgcctgtgtaccgaggtacggtagggtgtgtaggtgct
gatgcacaggtgttggaagaggttttgccagaatggcttttggagttcttgcttgcgaat
aaggcaccgcctgtaccgctggcgaaacttagttttgtacttcttcctgcggttattcca
cctgattctagagagatctatggggagaccttgccggaattgctcaataccgctcagtcg
aaactgtcagctagtagattcctgcgcgtgaaaaagctgacatatcatgtccaggagaaa
cttgacaagaaccctcaatccaaaccagcttcacctcgttcttcatctgatgctcccaat
accagccgaccatcgctaggccgtgggagcccagcatacgatggttccagttcaccagcg
gcgtctcggtcgtcaacgcctcgactttcgcctatgcacctgcataatcatggaacgcac
cttccacgtgctgaagatgtgtatgagattctgtgcaacgaccaggtgctttcgcttgag
atgacgcttgcggcggtgcgacaattcgtatggcggagttctggggagcttatcatgtac
tatcggaggaaagcgagacatagtccttctcctgttactcctggtatagcatattga

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