Fomitiporia mediterranea: FOMMEDRAFT_142432
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Entry
FOMMEDRAFT_142432 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
fme
Fomitiporia mediterranea
Pathway
fme00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FOMMEDRAFT_142432
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fme01007
]
FOMMEDRAFT_142432
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fme03016
]
FOMMEDRAFT_142432
Enzymes [BR:
fme01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
FOMMEDRAFT_142432
Amino acid related enzymes [BR:
fme01007
]
Aminoacyl-tRNA synthetase
Class I (U)
FOMMEDRAFT_142432
Transfer RNA biogenesis [BR:
fme03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
FOMMEDRAFT_142432
Prokaryotic type
FOMMEDRAFT_142432
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
Val_tRNA-synt_C
tRNA-synt_1e
DUF5870
Motif
Other DBs
NCBI-GeneID:
18672734
NCBI-ProteinID:
XP_007269401
JGI:
Fomme1_142432
LinkDB
All DBs
Position
Unknown
AA seq
1073 aa
AA seq
DB search
MLRRGWYRLLPPRLSHRSPPLIRLMADTTIASGTSTPENGAPNPNSKSAAKKEAKRLEKE
AKLAAKAAKVNASAAGSEKKQKEKKEKKDEEAPFVNTTPKGHKKDMMQPMASGYDPIAIE
SAWYDWWEAQGFFLPQTQADGSPKSEGSFIIPAPPPNVTGSLHIGHALTVAIQDTLIRWN
RMLGKTTLFVPGFDHAGISTQSVVEKRLYKTSGRTRHDLGREAFLETVWAWKNDYQTRIT
SQLKRLGGSYDWSRVAFTMDDNLSRAVVETFCRLREEGIIYRANRLVNWCVRLNTTLSNL
EVEQKQLTGRTLLNIPGYGPTEKFEFGVITSFAYPIEGSDEKIIVATTRPETMLGDTAVA
VHPDDPRYKHLHGKFARHPFIDRRLPIVTDAEAVDMEFGTGAVKITPAHDPNDYEVGKRH
NLEFINIMNDDGTFNLNAGERFAGMKRFHARVEVVKSLKAAGLYIETKDNPMQIPICSKS
GDVIEPVLKAQWWVNCKPLAEEAVKRTRAGELTINPKTSEAEWYRWLDGIQDWCISRQLW
WGHRCPAYFVRIESQEQDRSDDKNWVVGRTLEEATERATKLAGVAKFVLEQDEDVLDTWF
SSGLWPFSILGWPSETADIKHYYPSSMLETGWDIIFFWVARMVLLGIKLTGRMPFKEVFC
HAMIRDAHGRKMSKSLGNVIDPVDVIQGVSLEKLHEMLLEGNLDEKEIAKAKQGQKKDFP
KGIPQCGTDALRFALCAYTSGGRDINLEILRVEGYRKFCNKIFNATKFAMLKLDETFVPE
PLPKPTGKESLVEKWIFHKLNIAAEDVNKHLTDRNFMAATTAVYNFWLYELCDVYIEAMK
PMTDDSAALETRRSAQNTLYTCLDYGLRLLHSFMPFVTEELWQRLPRRPNDPTPSIMVSS
FPVFDKAFVFDKGEKDFDLVFSSIRTGRSLAAQYNIQSDIKLFILAQTDDETKLFETQIP
TIITLTKGCKGAQVVRNVNDIPAGCGSAVLTPTVAVHLLVRGLVDLDAEIAKCDKKLDLA
TLAADKIRKIIAVPDYESTVPENVRAANAEKLKTYEAEIETLRLSKESFAKLK
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgaaggggatggtatcgattgttacctccccgcctctcccatcgttctcctccg
ctcattagactaatggctgataccacgatcgcgtctgggacatccacccctgaaaatggt
gctccaaacccgaattcgaagagcgcagcaaagaaagaagccaaacgattagagaaggag
gcaaaacttgctgcgaaggctgcaaaagtcaacgcttcagccgccggatccgagaagaaa
cagaaggagaaaaaggagaagaaagatgaagaagctccattcgtgaacaccacgccgaag
ggccacaagaaagatatgatgcagcccatggctagcggatacgatcccatcgctatcgaa
tccgcgtggtacgactggtgggaagcccaaggcttcttcctacctcaaacgcaagcagac
ggttcaccaaaatctgaaggctccttcattatacctgcacctccaccaaacgttaccgga
agcttgcacatcggacacgcacttaccgtagctattcaagatacgctcattagatggaat
cgtatgcttggaaaaacgacgctgttcgtaccaggtttcgaccatgctggtatttcgacg
cagtccgttgtagaaaagcgattgtacaagacgtcgggacgaacaaggcatgatcttggg
cgcgaagcgttcttagaaactgtctgggcttggaagaacgattatcaaactcgaatcacg
agccagctaaaaagactgggagggagttacgattggagtcgtgtagcattcacaatggat
gataacctatctcgagctgtcgtcgaaacgttctgtagattacgtgaagaaggtattatc
taccgagcgaatcgtctcgtaaactggtgtgttcgtctgaacacgacgctttccaacctc
gaagtcgagcaaaagcagttaacgggtagaactcttttgaatattcctggatatggtccg
acggagaaatttgaatttggtgtcatcacctcgtttgcgtatcccattgaaggatcggat
gagaagattatcgttgctactactcgtcctgagacgatgcttggtgatacggctgttgct
gtgcacccggacgatccacgatacaagcatctacacggcaaattcgctcgccatcccttc
atcgaccgacgtctacccatcgtcacagacgccgaggcagtcgacatggaattcggaacc
ggtgcagtcaagatcacacctgcacacgacccaaacgactacgaagttggtaaacgacac
aacctcgaattcatcaacatcatgaacgacgacggcacctttaatttaaatgctggtgag
cgcttcgcggggatgaaacgtttccatgcacgtgtggaagtcgtcaaatctttgaaagct
gctgggttgtacattgagacgaaagacaatccgatgcaaatcccgatatgctcgaagtcg
ggagatgtgatcgaacccgtgttgaaagcgcagtggtgggttaactgcaagccgctcgcg
gaagaggctgtgaaacggactagagcgggcgaactcacgattaacccgaagacatcggaa
gcagagtggtatcgctggttagatggtatccaagactggtgtatctcacgccaactttgg
tggggacatcgttgtccggcgtacttcgtacgtatcgagagccaggagcaggatcgttca
gacgacaagaactgggtcgtgggccgcacgttggaagaagctactgaacgagctaccaag
cttgctggggttgccaagttcgttctagagcaagatgaagatgtgcttgatacatggttc
tcctctggtctatggcctttctccatcttaggctggccctcggagactgcagatatcaaa
cactactatccatcttcaatgctcgagacgggatgggatatcattttcttctgggtagca
cgaatggttctcctcggtatcaaactcactggacgcatgccattcaaagaggtcttctgc
catgctatgattcgcgatgctcacggacgtaaaatgagcaagtccctcgggaatgttatt
gacccggttgatgtcatccaaggtgtctcactcgagaagttacacgaaatgcttctagag
ggtaacctcgatgagaaggaaatcgcgaaggcgaagcagggacagaagaaagacttcccg
aagggtatcccgcagtgcggtacagacgctctgcgattcgcattatgtgcatataccagt
ggtggtcgtgatatcaatttggaaattctgcgtgttgaggggtacaggaagttctgtaac
aagatcttcaatgcaacgaagttcgcgatgctcaagttggatgagactttcgttccggaa
cctttacccaagccgactggaaaggaaagcctagttgagaaatggattttccacaagctc
aacattgcagcagaggatgttaacaagcatctcactgatcgcaacttcatggctgcaact
actgcagtctacaacttctggctctacgaattgtgtgacgtctatatagaagcaatgaaa
cccatgaccgacgacagcgcagctctagaaactcgtcgctcggcgcaaaatacactttat
acctgtctagattatggtctccgactgttacattccttcatgcccttcgtcaccgaagaa
ctctggcaacgtctgccgaggcggccgaatgaccctactccatccatcatggtctcctcc
ttcccggtctttgataaggcgtttgtgtttgacaagggagaaaaggacttcgacctcgtc
ttcagttccatccgaacaggccgatcgcttgcggcgcagtataatatccagagcgacatc
aaattattcattctcgctcagactgacgacgagacgaagctcttcgaaacacaaatccca
acgatcatcacgcttactaaaggctgcaaaggcgcacaggtcgttcggaacgtgaatgac
atccctgcaggatgcggctcggccgtactaacacctacagttgctgtgcatcttctcgtc
cgaggtcttgtggatctagacgcagagatcgcgaaatgcgacaagaaactcgacctggcg
actctcgccgccgataagatccgaaagatcattgcagtccccgactacgagtccactgta
cccgaaaacgtccgtgctgcgaatgcggagaagctgaagacgtacgaggcggagatcgag
actctgaggctttcgaaggagtcattcgcgaagttgaagtga
DBGET
integrated database retrieval system
