Fomitiporia mediterranea: FOMMEDRAFT_142893
Help
Entry
FOMMEDRAFT_142893 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K12881
THO complex subunit 4
Organism
fme
Fomitiporia mediterranea
Pathway
fme03013
Nucleocytoplasmic transport
fme03015
mRNA surveillance pathway
fme03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FOMMEDRAFT_142893
09122 Translation
03013 Nucleocytoplasmic transport
FOMMEDRAFT_142893
03015 mRNA surveillance pathway
FOMMEDRAFT_142893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fme03019
]
FOMMEDRAFT_142893
03041 Spliceosome [BR:
fme03041
]
FOMMEDRAFT_142893
Messenger RNA biogenesis [BR:
fme03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
FOMMEDRAFT_142893
TREX complex
FOMMEDRAFT_142893
Spliceosome [BR:
fme03041
]
Complex C
Other components
EJC/TREX
FOMMEDRAFT_142893
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
FOMMEDRAFT_142893
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
18672800
NCBI-ProteinID:
XP_007270627
JGI:
Fomme1_142893
LinkDB
All DBs
Position
Unknown
AA seq
268 aa
AA seq
DB search
MSLPRATPRAKHYHGGAKGKVTGNTVQPAPAWRVRNIPPESQSQNAIDLGSKILLSNLPL
DVSEDEIVDLMKKTIGPVVLRDSFLICNSKGVPRGAAIVTFTRGIDASRARARYNGKVID
GKRAIKLEIILDRDVDSSRPSQQQPPTAPNGVQQQKPKTLFDRLGPLPSSPSHQPTKANG
VANSRRTPSLLDRAAAAPFLSTPPSKPRSFSTPIQPRVVPPSAPAALNKKRQKKGPKRVR
KSVADLDREMEEYAVGRRNFNSDGVMMI
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgtctctaccacgagcaacaccacgcgcaaaacactatcacggcggcgcgaagggcaaa
gtaaccggaaacacggtccaaccagctccagcatggcgtgtacgaaacattccccccgag
tctcagagtcagaatgccatagatctggggagtaagatattgttgagtaacttaccgctt
gatgtatcggaggatgagatcgttgacttgatgaaaaagacgattgggcctgttgtctta
cgagactcgtttttaatttgcaactcgaagggtgttccgcgaggcgcagctatcgtcacg
tttacgcgcggaattgacgcgtcgagggcgcgagcgaggtataatgggaaagttattgac
ggcaaacgcgcaatcaaactcgaaataatcttagaccgagacgtcgactcctcacgtcca
tcccaacaacagccacccaccgcaccgaatggtgtacaacaacaaaagcccaaaacatta
tttgatcgtctcgggcctctaccttcctctccttctcatcaaccaacaaaagcaaatggc
gtagcaaatagtcgacgaacaccatcactactcgaccgcgcagcagcagccccattcctc
tccacacctccatccaaacccagatccttctcaacacccatacaaccacgcgttgtacca
ccatcagcaccagcagcccttaacaaaaagcgacaaaagaaaggacccaaacgcgttagg
aagagcgttgcagaccttgatcgcgagatggaggaatacgctgttgggcggaggaacttc
aatagtgatggtgtgatgatgatatag
DBGET
integrated database retrieval system