Fomitiporia mediterranea: FOMMEDRAFT_143300
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Entry
FOMMEDRAFT_143300 CDS
T03132
Name
(RefSeq) Sm-like ribonucleo protein
KO
K11087
small nuclear ribonucleoprotein D1
Organism
fme
Fomitiporia mediterranea
Pathway
fme03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FOMMEDRAFT_143300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fme03041
]
FOMMEDRAFT_143300
03032 DNA replication proteins [BR:
fme03032
]
FOMMEDRAFT_143300
Spliceosome [BR:
fme03041
]
Complex A
U1 snRNP components
Sm proteins
FOMMEDRAFT_143300
U2 snRNP components
FOMMEDRAFT_143300
Complex B
U1 snRNP components
FOMMEDRAFT_143300
U4/U6.U5 tri-snRNP components
FOMMEDRAFT_143300
Complex C
U2 snRNP components
FOMMEDRAFT_143300
DNA replication proteins [BR:
fme03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
FOMMEDRAFT_143300
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
EBNA2_Core
Gemin7
BPL_C
Motif
Other DBs
NCBI-GeneID:
18672853
NCBI-ProteinID:
XP_007271486
JGI:
Fomme1_143300
LinkDB
All DBs
Position
Unknown
AA seq
119 aa
AA seq
DB search
MKLVRFLMKLNNETVTIELKNGSIVHGTITGVDMQMNTHLKTVKMTMRNRDPQSLDTLSI
RGNNIRYFVLPDALPLDTLLVDDAPKPKNRKKEEVRGRGRGRAVVDRGRPRGRGRGRGR
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgtaagattcttgatgaagttgaacaacgagacggtgacaatcgagctcaaa
aacggttcgatcgtgcatggaacgatcacaggtgtggatatgcagatgaacacccatctc
aaaaccgtcaaaatgacgatgcgcaaccgtgacccacagtcgctcgacacgctctccatt
cgcggaaacaatatccgctattttgttctccccgacgctctgccgctcgatacccttctg
gttgacgacgcgccaaaaccaaagaatcgcaaaaaggaagaagtacgtggacgaggacga
ggacgtgccgttgtcgatcgcggacgtccgcgtggtcgtggacgtggcaggggtcggtga
DBGET
integrated database retrieval system
