Fomitiporia mediterranea: FOMMEDRAFT_143991 Help Entry FOMMEDRAFT_143991 CDS       T03132                                  Name (RefSeq) WD40 repeat-like protein   KO K12662   U4/U6 small nuclear ribonucleoprotein PRP4 Organism fme  Fomitiporia mediterranea Pathway fme03040   Spliceosome Brite KEGG Orthology (KO) [BR:fme00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     FOMMEDRAFT_143991  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:fme03041]     FOMMEDRAFT_143991 Spliceosome [BR:fme03041]  Complex B   U4/U6.U5 tri-snRNP components    U4/U6 snRNP specific factors     FOMMEDRAFT_143991 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd EIF3I WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st PRP4 Beta-prop_EML WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_HPS5 Beta-prop_WDR19_1st WD40_like RMC1_N Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_RIG_1st Beta-prop_EIPR1 Beta-prop_WDR75_2nd WD_LRWD1 Motif Other DBs NCBI-GeneID:  18672935 NCBI-ProteinID:  XP_007261650 JGI:  Fomme1_143991 LinkDB All DBs Position Unknown AA seq 468 aa AA seqDB search MAVPTDDARVRARLREIGEPITLFGERPADRRDRLKYVLSQISVARGGDLPDLESESESD EEETVEEFYTPGSFELLEARRRIAEFSIPRAQKRVAQQRIESRMPLRQLIDIRKTVFGEI KTFANMGSQIGDERPISMVRFSPDSQILATGSWSGGVKLWNIPQCTTIRTLRGHGDRVGG LAWHPQATLSQSADAVNLVTGAGDFNIHLWSLSSDAPLAILKGHEGRVCRTAFHPSGNYV ASASFDTSWRLWDVSTQIELLLQEGHSKEVYSVEFQDDGALIASGGLDAIGRVWDLRTGR TAMVLDGHVQGIYSIAFSPNGYQIATGAGDDTVRIWDMRSLRPLYTIPAHRSNVSDIRFF RGNNLPVDRVQDVKMKDEGDDIDDADVSADKSGVSKEHEERYRCGLYFATAGYDGLVKLW SADDWQLLRTLTTDAGKVMSVDLSNDGKYLVSGTYNRNFQLYAPEGSA NT seq 1407 nt NT seq  +upstreamnt  +downstreamnt atggccgtcccgacggacgatgcgcgtgttagagcgcgtttacgagaaataggagagcca ataaccctcttcggcgagcgaccagccgaccgtcgagaccgacttaaatatgtcctttct caaataagcgttgcccgtgggggtgacttgccagaccttgaaagcgagtctgaatcagac gaagaagagacagtcgaggagttctacaccccaggatcatttgagcttttagaagcacga cggcgaatagcagagttctcaatacctagagctcaaaagcgagtcgcccagcagcgcatt gaaagtaggatgcctttgagacagcttattgatattcgcaaaacagtcttcggcgagatt aaaacgtttgcaaatatgggctcacaaattggtgatgagcgtccgatttctatggttcgc ttctctcccgatagccagatacttgcaactggtagttggtcaggaggtgtaaaactctgg aatattccgcaatgtactactattcgcacattacgaggccacggagacagagttggagga ttggcctggcatccccaagcgaccctctcgcagagtgctgatgcggtgaacctcgttact ggtgcaggtgactttaacatacatttatggtcactttcgagtgatgcacctttagcaata ctaaaaggacacgaaggtcgagtctgtcgtacagccttccacccttcaggaaactatgtc gcaagtgcaagtttcgatacgtcgtggagattatgggacgtatcaacgcaaatcgaacta ctacttcaggaaggacactccaaggaagtttactcagttgaatttcaagacgacggtgca ttaatcgcttcaggaggacttgatgcaattggaagagtatgggacctcagaacaggtcga acagcaatggttcttgacggacacgtacaaggaatctactccatcgcattctcaccaaac ggctatcagatagctacaggagcaggcgacgacacagtccgaatctgggatatgcgttca ctcagaccactctacaccatccccgcacaccgatcaaacgtctctgatatccgtttcttc cggggtaacaacctcccagtcgaccgggtgcaagatgtcaagatgaaagatgaaggcgac gatattgacgatgcagatgtttccgcggacaagtcaggcgtatcgaaggagcacgaagaa cgataccgatgtggattgtacttcgccactgctgggtacgatggactcgtaaaactctgg agcgcagacgactggcagctattacgcacactaaccacggatgccggaaaagtcatgtcc gtcgacctttcaaacgacggcaaatacctcgtctctggcacatataaccgtaacttccaa ttgtacgcgcctgaaggcagtgcataa

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