Fomitiporia mediterranea: FOMMEDRAFT_144395
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Entry
FOMMEDRAFT_144395 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
fme
Fomitiporia mediterranea
Pathway
fme04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
FOMMEDRAFT_144395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fme04131
]
FOMMEDRAFT_144395
Membrane trafficking [BR:
fme04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
FOMMEDRAFT_144395
Protein recycling
Other Rab GTPase associated proteins
FOMMEDRAFT_144395
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
CUE
DMA
Motif
Other DBs
NCBI-GeneID:
18672984
NCBI-ProteinID:
XP_007262519
JGI:
Fomme1_144395
LinkDB
All DBs
Position
Unknown
AA seq
800 aa
AA seq
DB search
MSANAEPLTADLNGLSISENEQSADSNPWSIQVQGPVRPPLKTPDPVLIEQSLGEQSTGA
EPEPEPDTRPRTSAEVLSEFDPLADTKEADARQAWASSTGHPMPPKPLSLPSPVDVPSST
TVPRDTAVANASPPGIGSGLASLANLAKSFTLPKVRTRSVDIAPPPNIVTPNTISTFAAQ
QRSRPDTPQSAPPASQQNTSTDNGSNADPVTDSTSHTPNPRREPPPFDFQLFLDQMKSKS
AEPVAKYLRSFLSNFAKKPLAINEQIKVINEFLNFISIRMRDADIWRNATEDEFDNAMEA
MEKLVMNRLYEFTFVPQLAEAQPPRPITTDDLERDGILAQRIALFSWIEEKHLEVPDSAD
GGGFLMFAQQELLKINHYKAPRDKLICVLNCCKVIFGLIRHLHKEENADSFVPILIFVVL
KANPPNLISNIEYIQRFRNPQKLQSEAGYYLSSLMGAVQFIETLDHTSLSHITAEEFERN
VEFAIHDLPGSPEPNEKPSPFASQPSSRPTTPSRSSSLSALSSTSGPSTPQRPRLGPDLG
PSTGASPHAGEESAQPLSLSLGGLGTAGGNFADDTRRFLQKTGDAIGKPFNALGRFLGEA
LDGLDTLPPGVSSGRRGSLPGGTAMAGPSELNVGGDTLSPSTPPIQTPYKPRIRPSTPNT
QTGPQNTPARSSNSGWSTPDSRFGAIPTPSRIGPGTYPTRPGGGEFISPLPSRLSSDFSP
GAGTTGPEGQGLSRTPTPALDLAGVQAEIDLAHARAADASLGTLLQIFPAVDREVAQWVL
EAEGGDLGRSIEKLLEIGGG
NT seq
2405 nt
NT seq
+upstream
nt +downstream
nt
taatgtctgcaaatgccgagccgttgacagcggacctcaatggtctatctatctcagaaa
acgagcagtctgctgactcaaatccttggagtatccaagtccaaggtcccgttagacccc
cgctcaagactccggatcctgttctcatagaacaatctctcggcgaacagagtacaggag
cagaaccagaaccagaaccagacacaagaccacgcacaagtgcagaagtacttagcgaat
tcgatcctctcgccgatacgaaggaagcggacgcgagacaagcatgggcgagctctaccg
gtcatccaatgcccccaaagcctctctctttaccttcaccggtagatgtaccttcgagta
cgacagttcctagagataccgccgtcgcaaacgcgtctcctcctggaatcggttcaggcc
ttgcttcactggccaaccttgcgaaatcgttcacgcttcccaaggtccgaacacgttctg
tggatattgcaccgcctcccaacatcgtcacgcccaataccatatccacgttcgccgcgc
agcagcgatcacgaccagatacacctcaaagcgctcctcccgcttcgcagcaaaatacaa
gcactgataacgggtcaaacgccgatccggtgactgactcgacgtcgcatacacccaatc
cgcgcagagaacctcctccgtttgatttccaactcttcttggaccagatgaagtcgaaga
gtgcagaacctgtagcaaaatacctacgctcatttctgagcaacttcgcgaagaagccgc
ttgcaataaacgaacaaattaaggttatcaacgagtttctgaattttatctccatacgca
tgcgagatgccgacatctggcgaaacgctacggaagatgaatttgataacgcgatggagg
caatggagaaactggtcatgaacagattatatgaattcacgtttgttcctcaattggccg
aggctcaacctcctcgtccaataacaacggacgacttggagcgagatggaatactcgcac
aacgaatcgcgctcttcagttggatcgaggagaaacacctcgaagtgccggactcagcgg
atggcggtggattcctcatgttcgctcagcaagagttactgaagataaaccactacaaag
cgccgcgtgacaaacttatctgcgtactcaactgttgcaaggtcatattcggtttaatca
ggcaccttcacaaagaagagaatgcagactccttcgtaccaatcctaatctttgtcgtgt
taaaagcgaatccaccaaacctcatctcaaatatcgaatacatccaacgcttccggaatc
cgcaaaaactgcaaagcgaagcaggatactacttatctagcctaatgggtgccgtacaat
ttatcgaaactctagaccacaccagcctctcgcacatcaccgccgaggaattcgagcgta
acgtcgaattcgccatccacgatctccccggttctccagaacccaatgaaaaaccgagtc
cttttgcttcccaaccgtcatcacgacccaccacgccttcacgttcatcctcactctcag
ctttatcttctacatccggaccttcaacgcctcaacgacctcgtcttggtccggatctgg
gtccgtcgacaggtgcctccccacatgcaggcgaagagtccgcccagcctctttctcttt
ctctcggtggtctcggtacagcaggtgggaacttcgcagacgacacacgccgcttcctcc
aaaagacaggtgacgcaatcggtaaaccattcaacgctctcggtcgtttcctcggtgaag
cactcgacggactggataccttacccccgggtgtcagcagcggacggagaggaagtcttc
ccggaggtactgcaatggcgggcccatctgaattgaatgtaggaggtgacaccctctctc
catccacgcctcccatccaaacgccttacaaaccacgcatccggccctccactcccaaca
cccaaaccggtccacaaaacactccggctcgctcatcaaactcaggctggagcacccccg
actcccgcttcggcgccattcccactccctcccgtatcggcccaggtacctatcccaccc
gcccaggaggcggcgagttcatctcccccctcccatcccgcctctcctctgacttctctc
caggcgccggtacaacgggtccagaaggtcaaggtctctcacggacgccaacacccgcgc
tagacctcgcaggcgtccaagcagagatcgacctcgcccacgcacgcgccgccgacgcct
ccctcggcacactcctccaaatcttccccgctgtagatcgtgaagtcgcccagtgggtac
tggaagctgagggtggtgacctcgggaggagtatcgagaagttgcttgagattggtggcg
gttag
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