Fomitiporia mediterranea: FOMMEDRAFT_146600
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Entry
FOMMEDRAFT_146600 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K14557
U3 small nucleolar RNA-associated protein 6
Organism
fme
Fomitiporia mediterranea
Pathway
fme03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
FOMMEDRAFT_146600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fme03009
]
FOMMEDRAFT_146600
Ribosome biogenesis [BR:
fme03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
FOMMEDRAFT_146600
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
U3_assoc_6
TPR_14
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
Suf
Motif
Other DBs
NCBI-GeneID:
18673219
NCBI-ProteinID:
XP_007266461
JGI:
Fomme1_146600
LinkDB
All DBs
Position
Unknown
AA seq
491 aa
AA seq
DB search
MERVQFQQEQMLAELKDLVQKGLFSQNEIKQIMKKRTAFETALVRRIPKKSDFLRYAAYE
MNLEALRKKRAERLHVPKGPPTISDYALIRRQFQVFERALKKFKDDLGLWIQYIQAAQRA
KARALVSRICGRALQLHPNSPALYILAASHELNHLSHSAARVLLQRGIRLNGDSVELWRE
YLKMELGFVESLRRRWDVLGLKVQKGRSSSGEDASQEELEVDHLQDNPTAKSTKNPSSEQ
DIGDDEQARKEILNGALVRTVISSAIKAIPTSELFNSTHSVLTTYPCPPSLRRSLLDHFY
SSLHEQILSTTNITSPSKTSKSNRKAYAQAARLYASRNLEKPDLEGEAIVDALQIANEDL
MGRVRLRKDDEIATVYTEFTCEWFEKDIDEHLNLYLVASLQSLCLSVRSSTLYATHLHLL
FSPKNPNPISSAKVLKLARKYAAKYHHSTSRSAIGIDEDAANEFNQRLREIVERLEKGDD
GIQAATEDESD
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggagagggtgcagttccagcaggagcagatgctcgccgagctcaaggatttggtgcaa
aaaggcctcttctcacagaatgaaattaaacaaatcatgaagaaacgaacagccttcgag
acagcccttgtgcgtcgtattccgaagaagagtgacttcctacgttacgccgcatacgag
atgaacctcgaagctctgcgaaagaaacgagcagaacgtctccacgtgccaaaaggacct
cccacaatttcggattatgctcttatacgacgacagttccaagtcttcgaacgtgcatta
aagaagtttaaagatgaccttggtctatggatccaatacattcaagcagcgcagcgcgca
aaagctcgagcacttgtttcacgtatctgtggtcgtgctcttcagctacatccgaattct
cctgcactctacattctcgcggcctcgcacgaactcaaccatctctcgcattctgcagct
cgtgtacttttacaacgcggtattcgcttaaacggtgatagtgttgagttatggagggaa
tatctgaagatggaattgggattcgtggaatcgttgagacggcgatgggatgtgttagga
ctgaaagttcaaaagggtagaagtagctcgggcgaggatgcttcgcaagaagaacttgaa
gtagaccatcttcaagataaccctacagcgaagagtactaaaaatccatcgtctgagcaa
gacattggtgacgacgaacaagctcgaaaagagattcttaacggtgctcttgtcaggaca
gtgatatccagcgccatcaaagccatcccaacgtcggagctcttcaactcaacccactcc
gttctcactacctacccatgtccgccatcactccgtcgttccctcctagatcacttctac
tcttctcttcacgaacaaatcctttcaactacgaacatcacaagtccttcaaagacttca
aaatcgaaccgtaaagcatacgcacaagccgcaaggctttacgcaagtcgcaacttagaa
aaacccgatttagagggagaagctatcgtcgatgctttgcaaatcgcgaacgaagacctc
atgggacgagtaagattacgcaaggacgacgaaatagctaccgtatacactgaattcacc
tgcgagtggttcgaaaaggatattgacgaacatttgaacttgtacctcgtggcgtcgctc
caatccctttgcttgtcagtccgatcatccacactctacgcaacgcaccttcaccttcta
ttctctccgaaaaatccaaatcccatatcgtcagcaaaagtgcttaaactggctaggaaa
tatgcagcaaaatatcatcattcgacatcacgctcggctattggtatagacgaggatgct
gcgaatgagtttaatcagagattgcgggagattgtcgagagacttgagaagggagatgat
ggtatacaagcagcgaccgaggacgaatccgattag
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