Fomitiporia mediterranea: FOMMEDRAFT_147787
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Entry
FOMMEDRAFT_147787 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K14306
nuclear pore complex protein Nup62
Organism
fme
Fomitiporia mediterranea
Pathway
fme03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
FOMMEDRAFT_147787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fme03019
]
FOMMEDRAFT_147787
Messenger RNA biogenesis [BR:
fme03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
FOMMEDRAFT_147787
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nsp1_C
Motif
Other DBs
NCBI-GeneID:
18673331
NCBI-ProteinID:
XP_007268457
JGI:
Fomme1_147787
LinkDB
All DBs
Position
Unknown
AA seq
584 aa
AA seq
DB search
MSEPLKGGFGSFTAETPFKPSGSTGTTQPTSVFGNPAPAANTGTNTQATSAPSAFGGTGG
TGSLFGGPKPATGSLFGGGTAGTTTTGTAPSATPVTGGGGSGLFGFGATSATPPAGQNAS
PAPTAPATSAFGGGNLFGAKPADQSANAGAAGAPAAPKPTTGLFGTTTGNAAGTQSAPAT
TSTTPSLFGKPADAGTSTPAPAPTAPAGGSIFGTNLFGKKPDTPSNANATTSSTPAAPAT
TSLFSGFGAKKDDAADKDKDKAPTPAAPTGVLFGQAAANKDAPAAGATGSGFSLFGQKPA
EKKDAPAEGEKKDATGAPVTTGLGTSSLAKPAGSGTPTPAGISVPPPSMLRGKTIEEIVN
KWSSELETHVREFNRLAGEIAVWDRSLVDNGNTIAALFQHVLMAEREQSDIEQSLKLVED
QQKELGATLEVYEKAAGEIFEGQGGGLRALDVGPADAERDKHYTLAADLNSNLDDLSRSL
MQMIESVNALSESPDGTIGGEGEVAKVKDEAPLEQIAQILSKHLESLQWIDGAVREVDSK
VTEVERLVRDASANGSRNSSAASSLAGSVNGTSGLTGSRGFGLR
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacctctcaaaggcggttttggttctttcacggctgaaacacccttcaagccg
tctggaagcactggcactacccagccaaccagtgtctttggcaatccagcaccagcagca
aatactggtaccaatacgcaggccacgagtgctccaagcgcgtttggtggtaccggaggt
actggtagcttatttggtggaccgaaacctgcgacaggttcattatttggcggagggaca
gcagggacaacaacgactggaacagctccttcggcgactcctgtgaccggtggtggagga
agtggtttgtttgggtttggagcaacgtccgcgacccctcctgctggccaaaatgcatct
ccggctcctacagcccctgcgacgtcagcatttggtggcgggaacttatttggcgcgaaa
ccggctgaccagtcggcgaatgctggtgcggctggtgcgccggcagcgcctaaacctaca
actggattatttggcacaacaaccggaaacgctgcaggcacgcaatcagcacctgcaacg
acatccacaactccaagcctcttcggaaagcctgcagatgcaggcacctcaacccccgct
cccgcccctaccgcacccgctggcggctccatctttggaaccaatctctttggcaagaag
ccagacacaccatcaaacgcaaatgcaaccacctcctctacacctgctgcacctgctacc
acgtcacttttcagtgggttcggagccaaaaaggatgatgcggcagacaaggacaaagac
aaggcaccaacgccagctgccccaacgggagtattatttggacaggcagctgcaaataag
gatgcaccggctgcaggagcaactggttccggattcagcttatttggccaaaaaccagca
gaaaagaaggacgcaccagcggagggagaaaagaaagatgctacaggtgcgcccgtcaca
accggccttggtacaagtagtttagcgaaaccagctgggtccggcacaccaacacccgcg
ggaatatccgtacctcctccatcgatgctaagagggaagacgatcgaggagatagtcaac
aaatggtcgtctgaacttgaaacacatgtgcgggaattcaaccgccttgcaggagagatt
gcagtatgggaccgatcgctcgtggataacgggaataccatcgctgcgctgttccaacac
gttttaatggctgagagagaacaatctgacatcgaacaatcattgaaattggtcgaggac
caacaaaaagagctgggtgccacgttggaggtgtatgaaaaggcagctggcgagatcttc
gagggacaggggggaggattacgcgcgctagatgttggccctgccgatgctgaacgcgat
aaacattacactctcgctgctgatctgaactcaaaccttgatgacctctcgcggtcgctc
atgcaaatgatcgaatccgttaacgcgctctccgaatcacctgatggcaccatcggaggt
gaaggtgaagttgcaaaggtgaaagacgaagcaccacttgaacaaatcgcgcaaatcctg
agtaaacatctggagagtttgcaatggatagatggcgctgtgagggaggtggacagtaag
gttacggaagttgagcggcttgtgcgggatgcttctgcgaatgggtcgagaaatagtagt
gctgcgagttcattggcggggtcggtgaatgggacttctgggttgacggggtcgcgagga
tttgggttaagatga
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