Fomitiporia mediterranea: FOMMEDRAFT_147949
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Entry
FOMMEDRAFT_147949 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
fme
Fomitiporia mediterranea
Pathway
fme00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FOMMEDRAFT_147949
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fme01007
]
FOMMEDRAFT_147949
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fme03016
]
FOMMEDRAFT_147949
Enzymes [BR:
fme01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
FOMMEDRAFT_147949
Amino acid related enzymes [BR:
fme01007
]
Aminoacyl-tRNA synthetase
Class II (U)
FOMMEDRAFT_147949
Transfer RNA biogenesis [BR:
fme03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
FOMMEDRAFT_147949
Prokaryotic type
FOMMEDRAFT_147949
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2d
PheRS_DBD3
tRNA_synthFbeta
tRNA-synt_2
tRNA-synt_2b
Motif
Other DBs
NCBI-GeneID:
18673349
NCBI-ProteinID:
XP_007268705
JGI:
Fomme1_147949
LinkDB
All DBs
Position
Unknown
AA seq
502 aa
AA seq
DB search
MEAVQELILKTLDSEGSIKDTRNLVLPGESQPANSQDAQLIVLGALNSLASREMLTYETR
EIQSHVLAPEGAQIALEGSHEARVWLALPMKGEGQPISVKELKQKVGDEAAKVGQGNAFK
NGWIAKEGDGFVKKVASIVDATQLEMREVDSTGTLKAGEKALAALRKRKLITQKKGQWFT
VYKGPNFSTSLAKPETDLTADMLVSGAWKTANFKKYNFEALGIPTSGGALHPLLKVREEL
RQIFFEMGFAEMPTSSFVESSFWNFDALFVPQQHPARDMQDTFYLSDPIDSLDPPKDYYD
RVAKVHEHGDYGSLGYRAPWDEHESRKLVLRTHTTASSSRILREIAQQPGGFKPAKLFSI
DRVFRNEAVDATHLAEFHQVEGVVADHNITLGDLIGFMATFFNKMGIQDLKFKPAYNPYT
EPSLEIFAFHPTLNKWVEIGNSGMFRPEMLEPMGFPKDVRVLGWGLGLERPTMIRYGINN
IRTLVGHRVSIEGVEKAPAVRF
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtacaagaactcatcctcaaaactcttgattcagaaggctccatcaaggat
acccgtaatcttgtactacctggagaatcgcaacctgccaactcgcaagatgctcaactt
attgtccttggtgcactcaactcactcgcaagtcgagagatgttaacatatgagactcgt
gaaatacaatcgcatgtactagctccagaaggtgcgcaaatcgcgctggagggatcgcac
gaagcgagagtgtggttagctctgccaatgaagggcgaggggcagcccatttccgtgaaa
gagctgaagcaaaaggtcggtgatgaagctgctaaagttgggcaaggtaacgccttcaag
aatggctggattgcgaaggaaggagacgggttcgtgaaaaaggttgcttcaattgttgac
gcgacgcaattagagatgcgggaggtagactcaacggggacacttaaagccggagagaag
gcattagcagcattaaggaagcgaaagctcattacacaaaagaagggacaatggttcaca
gtttacaagggaccgaacttcagcacatctcttgcgaaaccggaaactgatcttactgcg
gatatgcttgtatctggagcctggaagactgcaaacttcaagaagtacaacttcgaggca
ctaggcattcctacgtctggcggtgctcttcatcctctcctcaaggtcagagaagaactc
aggcaaatattctttgaaatgggcttcgccgaaatgcctacttcgtccttcgtcgaatct
tccttctggaacttcgacgcactgttcgtacctcagcaacatcctgcacgcgacatgcaa
gataccttctatctctccgacccaatcgactctctggaccctcccaaagactactacgac
cgcgtcgccaaagtccacgaacacggagattacggttcattaggttatcgagcaccgtgg
gacgaacacgagtcccgcaagttagtattacgaacccataccaccgcgtcatcatcacga
attttacgagagatcgctcaacaacccggtggattcaagccggcgaagctcttcagtatt
gatcgtgtcttccgaaacgaagctgtagatgcgactcatctcgctgagttccatcaagta
gagggcgttgttgctgatcataacattactttgggagatctcattggtttcatggctacg
ttcttcaataaaatgggtatccaagacctgaaattcaagcccgcgtacaatccttacaca
gaaccgtcactagagatttttgctttccatcccacattgaacaagtgggtagagattggg
aactccggcatgttcaggcccgagatgctggagcctatgggtttcccgaaagacgtccgt
gtcttgggttggggactcggtttagagcgacccacgatgattagatatggaataaacaac
attagaacactagttggacatagggtatcgattgaaggcgtagaaaaggcccctgctgtc
aggttctaa
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