Fomitiporia mediterranea: FOMMEDRAFT_148054
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Entry
FOMMEDRAFT_148054 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K08739
DNA mismatch repair protein MLH3
Organism
fme
Fomitiporia mediterranea
Pathway
fme03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FOMMEDRAFT_148054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fme03400
]
FOMMEDRAFT_148054
DNA repair and recombination proteins [BR:
fme03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
FOMMEDRAFT_148054
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
HATPase_c
MutL_C
Motif
Other DBs
NCBI-GeneID:
18673359
NCBI-ProteinID:
XP_007268874
JGI:
Fomme1_148054
LinkDB
All DBs
Position
Unknown
AA seq
861 aa
AA seq
DB search
MDFSGIERLDTATRSKIRSTQILTSLPQIISELVQNSLDAGAKSIDVGVHCADWMCWVGD
DGTGISKDGLSLIAQGMEGGRYSSSKSYNLTSLEHVNTFGFRGEALASAADLSCIEISSR
TSRSKECWSVILKGGEKLYEGPSLRWRRERAGTTVSIRDVFFSLPIRRLSHPSPSRTIEL
VRRELETFALVFPHVSFTLKDASKEYCGTIDKSRVLTIPKTSSSMATFRHLFGRALVEHV
DTIYVQSGSMKLEGFISLVGSPSKSYQFLYVNRHILDSCELHRIIDKCFSSSTFGKHAYD
ESGELPSLRPGTRRSPRKSELRPVYVLNLTLPARNVDNCLEPSKTAVQFQDQNAVRSFLE
QTIQSFLCKHGFKATRSSDSRATHVNTANKRKRVDPVDASGTKLLERPESTASSSLQRLQ
LEERREDMFIQGPSLQDGDCELKWVDPCTGKTFLIDQRTGNSYMQDHHEERDESEASLRT
NRRTLVDTRWLKNAQGECQHACESEENMPDWIKEALQSNDNIAATERSIPRISSLKNVVD
QSDVAQRIPWLKQFDQTFSTTSGILAELGEASMFPFSRECLEKLEVLGQVDFKFIACLID
EESHAPSSSDAEGIPGTSERGSDVRMLVLVDQHAADERVRVERYLKSLCLGYLDRDREGV
ERRALDPPVPTLLTKFERDRLLDSERIKRAFSAWGLDFVDAPTGDRMCEENDNDEGYGLV
HCNSVPEVVADKLLDGSQGDLRELVKGYLARLEAEGMDESQGPSQAAADTDEFSWLKALR
HCPRELTELVNSRACRGAIMFNDRLSVEQCKRLLRQLSETAFPFQCAHGRPSVVALTTIR
DDRDTGRLKRSHRTIDWTNLA
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atggacttctcgggaatcgagagactggacactgctacgcgctctaaaatccgctccact
caaatccttacatcgctgccacagataatttcggagctcgttcagaattctttggatgca
ggagcaaagagtattgatgttggagtgcactgcgctgattggatgtgctgggtaggagat
gatgggacaggaattagcaaggatggattgtcgttaattgctcaaggaatggaagggggt
cgttactcatcttcaaagtcttataatctgacttctcttgagcatgtgaacacctttgga
tttcgaggcgaagctttggcctcagccgcggatctatcctgtattgagatatcttcaaga
acgtcgaggtcaaaggaatgctggtccgtaatactcaagggcggcgagaagctgtacgag
gggccgtcattgcgatggcgtagagaaagagccgggacaacggtttcgattcgagacgtt
ttcttcagtttaccgattcgcagactatcccacccaagtccctccaggacaattgagctc
gtccgacgagaactagaaacatttgcacttgtatttcctcacgtctcatttactctgaaa
gacgcatccaaagagtactgcggtactattgataaaagtcgcgtcttgactataccaaag
acctcctcgtcaatggcgaccttccgacatcttttcggcagagcgcttgttgaacatgta
gataccatatatgtccaatccggatcaatgaagctagagggcttcataagcttagttggt
tctccttctaagtcgtaccagtttctctatgttaatcggcatatactcgattcatgcgag
ctacatcgaataatcgacaaatgtttttcatcaagcacgtttggcaagcatgcttatgat
gaatctggagaactcccgtcgttacgaccaggtactcgacgctcacctaggaaaagtgaa
ctccggccggtctatgttctcaatcttacgctgccagcgcgaaatgttgacaactgtctg
gaaccgtcaaaaacagctgtgcaatttcaggaccaaaacgccgtcaggtcatttcttgaa
caaaccattcagtcatttctatgcaagcacggattcaaagctactcgatcaagcgattcc
cgtgccacccacgtgaatactgcgaataagcgaaaaagggtagatcctgtcgatgcttca
ggtacaaaactactcgaacggccagaatcgacagcatcttcgtcattgcagagactgcaa
ttggaagaacgaagggaagacatgtttatccaaggaccatctcttcaggatggagactgc
gagctcaagtgggtcgacccctgcaccggcaaaacctttctaatcgaccaacgtactggc
aattcgtacatgcaggaccatcatgaagaacgtgacgaatcggaagcttcattgcggaca
aatcgacgtacgttggtcgatacgcgttggctgaagaacgctcaaggcgagtgtcaacat
gcatgtgagagtgaggagaatatgccagactggattaaggaggccttacagtcaaacgac
aacattgcggcgactgaacgttctattccgcgcatatcctcattaaagaacgttgtggat
caaagtgatgttgctcaacggataccttggttgaaacagttcgaccagacgttttctacc
acctctgggatactggcggaactcggtgaagcctcaatgttcccgttttccagggaatgc
ctcgaaaagttggaagttcttgggcaagtggacttcaaatttatcgcatgtcttatagac
gaagagtcccatgcgccttcatccagcgatgcagagggaatacccggaacatctgagcga
ggatcagacgtccggatgcttgtacttgttgatcagcatgctgcagatgagcgcgtccgc
gttgaacgatatctcaagtcactatgccttggttacttagatcgcgatcgtgagggtgtg
gagcggcgtgcattggatccacctgtgcccacccttctcaccaagttcgagcgggaccga
cttttggattcggaacgaataaaaagagcattcagtgcttggggtctcgatttcgttgat
gcgccaactggtgatcgaatgtgtgaagagaatgacaacgacgaaggctatggcttggtt
cattgtaacagcgttccagaagtagtggccgacaagttgctcgatggttcccaaggcgat
cttcgagaactcgtcaagggctatctggctaggctcgaagccgaaggcatggacgagtcg
caggggccgagtcaagctgcagcagatacggatgaattttcttggctaaaggcacttcgc
cactgtccgcgggaattgaccgaattggtgaattctcgggcgtgtcggggagctatcatg
ttcaatgaccgactttcggtggagcaatgcaagcgacttcttcggcagctgtcagagact
gcgtttcccttccagtgcgcccatggacgaccatccgtagtggcactcacgactatacgc
gatgaccgagatactggacgtttgaagagatcacatcggaccattgactggacaaactta
gcttaa
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