Fomitiporia mediterranea: FOMMEDRAFT_149198
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Entry
FOMMEDRAFT_149198 CDS
T03132
Name
(RefSeq) RIO1-domain-containing protein
KO
K07178
RIO kinase 1 [EC:
2.7.11.1
]
Organism
fme
Fomitiporia mediterranea
Pathway
fme03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
FOMMEDRAFT_149198
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
fme01001
]
FOMMEDRAFT_149198
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fme03009
]
FOMMEDRAFT_149198
Enzymes [BR:
fme01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
FOMMEDRAFT_149198
Protein kinases [BR:
fme01001
]
Serine/threonine kinases: Other
RIO family [OT]
FOMMEDRAFT_149198
Ribosome biogenesis [BR:
fme03009
]
Eukaryotic type
Pre-40S particles
Kinases
FOMMEDRAFT_149198
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIO1
Pkinase
CDC45
Motif
Other DBs
NCBI-GeneID:
18673494
NCBI-ProteinID:
XP_007271353
JGI:
Fomme1_149198
LinkDB
All DBs
Position
Unknown
AA seq
674 aa
AA seq
DB search
MVTHANGCEQGQFDDAHEGSHNTTEVPETALVSNDSERVEGRGSANYIDDPNLLEWSEEE
DGEDDEDEDGIREEDFDDNRVDDEDWDVTERDFTKQYNRLRQHVAVRSGAAEGTQQATAK
STSAVAVLPAVNRPRRTGNAPTTQLSSSINHQDKTTTDQLASLSKYSGRLKHVHEPYRMG
MGASVNRKGPSAHANLKDKADRATNEQVLDPRTRIILYKMIGRGLLQEINGCVSTGKEAN
VYHALSPEGKHLALKIYKTSILIFKDRDRYVSGEHRFRTGYSRHNPRKMVRVWAEKEMRN
LKRLAVAGVPGPRPIEVRENVLVMEFLGDEEGWASPRLKDAKIPESEHPRLYQDLLLTVR
RLFHECHLVHADLSEYNILYDANSLFIIDVSQSVEHDHPHAFDFLRKDIGNVEEFFSRRG
VRTLGLRRAFDFVTRVRSSLLSELDSSVAEGESVSGGTNPLSKEKETLQRWLEMAETDGA
ERAEGVSNNESEVHASHEDAVFMRSFIPRNLNEVFDPERDVEVLTRGEGKKLIYADTIGL
VHPTSALTNKSESTPRKEGTTSVRFVEDGIQDMSIGEDVTSKAESKEDVGEVVELEGEEN
SSDDDDDDESSTATDDEKFESSKSGEHKPHGHKHEDRELKRERKKAVKEEAREKRKHKMK
KAEKKKKIKATRRS
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggtaacacatgccaatggctgtgagcagggtcaatttgacgatgcgcatgaaggttca
cataatacgactgaggtacccgaaacagcgttagtatctaatgacagtgaacgtgtggaa
ggaagaggcagcgcaaactacattgatgaccccaatcttctcgagtggtcagaggaagaa
gatggagaggatgacgaagacgaagacgggataagagaagaagattttgatgataaccgg
gtcgatgatgaggactgggatgtcactgagcgcgactttacgaagcaatataaccgattg
cgacagcatgtcgcagtgaggtcaggtgctgccgaagggacacagcaggcgacagctaag
agcacatccgccgtcgctgtgcttcccgctgtgaatcgtccacgacgaaccgggaatgca
cctaccacgcaattgtcgtcgtcgatcaaccaccaggacaagactactacggaccaactc
gcctcattatctaaatactccgggcgtctaaagcatgttcatgagccatataggatgggt
atgggtgcaagtgtaaaccgtaaaggaccaagtgcgcatgcaaacttgaaggataaagcg
gatcgtgctacgaatgagcaggtcctggacccacgaacgcgcattatattgtataagatg
atcggtcgcggactgttacaggagatcaatggctgtgtgagcactggcaaggaggcgaac
gtctaccacgccctgtctcccgagggcaaacatctggctctgaaaatctataaaacttct
attcttatcttcaaagatcgtgaccgctatgtttctggtgaacatcgttttcggactggg
tattcacgccacaacccacggaagatggttagagtgtgggcggagaaagaaatgcggaac
ctcaagcgattagcagttgctggtgttccaggtccgagacctatcgaagttcgagagaat
gtacttgtcatggaattcctcggtgacgaggagggatgggcttctcctagacttaaagat
gccaagattcctgaatctgagcatccaaggctctaccaagacctccttttaaccgtgcga
cgtctctttcacgagtgtcacctcgttcacgccgatctttccgagtacaatatactctat
gacgcaaattcgcttttcatcatcgacgtctcacagtctgttgagcacgaccatccacat
gcgtttgacttcctacgcaaggatattgggaatgttgaagagttcttttcgcgacgcggt
gtgcggactctgggtttacgccgagcattcgatttcgtgacccgcgtgcggtcgagtctt
ctatctgagcttgactcttccgtcgctgaaggggaatcagtaagcggagggacgaatcct
ctgtcaaaggaaaaggaaactttgcagcgttggctcgagatggctgagaccgacggtgca
gaacgagccgaaggagtgtcgaacaacgagtcagaagttcacgcttcccacgaagatgcc
gtcttcatgcgctctttcattcccaggaatctcaatgaagtattcgatcctgaacgtgac
gtcgaagtactcaccagaggagaagggaaaaaactaatatacgctgacactattggactc
gtacaccctacttcggctttgacgaataaatccgagtcgactccacgcaaagagggtacg
acttcggtaaggtttgtagaggacggcatccaggatatgtcgatcggtgaggatgttact
tctaaggcagaaagcaaggaggacgtcggcgaagtggtagaactcgaaggtgaagagaac
agctccgacgatgatgatgacgatgagtcctccacggctaccgatgacgagaaattcgaa
agcagcaaatccggcgagcacaaaccccacggccacaaacacgaagaccgcgagctgaaa
agggagcgaaagaaagccgtcaaggaagaagcccgagaaaaacggaaacacaaaatgaag
aaggcagagaagaagaaaaagataaaggcaacaagaaggtcttga
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