Fomitiporia mediterranea: FOMMEDRAFT_151576
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Entry
FOMMEDRAFT_151576 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
fme
Fomitiporia mediterranea
Pathway
fme00040
Pentose and glucuronate interconversions
fme01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
FOMMEDRAFT_151576
Enzymes [BR:
fme01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
FOMMEDRAFT_151576
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
18673876
NCBI-ProteinID:
XP_007262600
JGI:
Fomme1_151576
LinkDB
All DBs
Position
Unknown
AA seq
200 aa
AA seq
DB search
MTLEMVTTIDRPEIWNCLVPQALKRGSRRVKFDRKRISYIMTKNSNIHCPYILRLTARET
TWGEPNYSPPWCWIASKVLAPNDNIGIQQSNYVWVDHVDLSSVRMTRSLSSEVDLNTYIP
SFRFGTGHIFNSVFENNDDGINTRNGTQLPVENNVWSGLTKAVRSTDNGSAVSVDNEFSG
ATGTVPTGTFTDPTIQLFIN
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgactcttgaaatggtgaccactatcgacagaccagaaatctggaattgtcttgtgccg
caggcgctcaaacgtggcagtcgcagagtgaagttcgaccgtaagcgtattagctacatc
atgaccaagaattctaacatccattgcccctacatcctgcgactgacagctcgggaaacg
acatggggagagccaaattacagtcctccatggtgctggatcgcatcgaaggtccttgcc
ccgaatgacaacatcggtatccaacagtctaactatgtctgggtcgaccatgtcgattta
agctctgttcgtatgactcgtagtctatcatctgaggttgacttgaacacgtacatacct
tcattccgattcggaacaggccatatcttcaatagcgtattcgaaaataatgatgatggt
attaatacccgcaacggtacccagctccccgtagaaaataatgtctggtcgggattgacg
aaagctgtcaggagtactgacaatggttccgctgtctcggtcgacaacgaatttagcggt
gcgacgggtactgtgcccactggtaccttcacggaccccaccatacagttgttcattaat
tga
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