KEGG   Fomitiporia mediterranea: FOMMEDRAFT_152211
Entry
FOMMEDRAFT_152211 CDS       T03132                                 
Name
(RefSeq) transducin family protein/WD-40 repeat family protein
  KO
K14791  periodic tryptophan protein 1
Organism
fme  Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:fme00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:fme03009]
    FOMMEDRAFT_152211
Ribosome biogenesis [BR:fme03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    FOMMEDRAFT_152211
  Pre-60S particles
   Other pre-60S particles
    FOMMEDRAFT_152211
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40_CDC20-Fz WD40 Beta-prop_WDR5 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd WD40_RFWD3 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_C WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_Aladin EIF3I Beta-prop_WDR36-Utp21_2nd WDR55 WD40_MABP1-WDR62_2nd
Other DBs
NCBI-GeneID: 18673975
NCBI-ProteinID: XP_007263150
JGI: Fomme1_152211
LinkDB
Position
Unknown
AA seq 581 aa
MSGLISCVSWVKRGVAAQHPQKYNLDERELERVSKLARIEIEDARQELERAHEAAKLMGR
GAEGAEADDRGGEDEDEWVDEDEQMDVEDLETKNKNDEDDLAKYNLDEYDKESKSIAAGP
FSNIKGLVYYKDNDEDPYITLNEDDEEIEREELEVLPTDNLLVAAKTEDEISQLEVYVYD
ETQENLYVHHDIMLPAFPLCLEWLDFPPAGRPSSTTSASIPNNNNISNKASEMAIDLDNN
PSPSKQFGNYIAVGTFDPEIEIWSLDTVDALYPDSMLGRPDITSAHVPTPLGTGKKKRKK
QKHRPTSTAHHVDAVLSLAWNRAHRNLLASASADRTVKLWDLSREPSATGDGGGAIRSFD
VHKDKVQTVQWNEKEPTVLLTGSYDRTVRTFDTRAPTAGVGAVVGADVEAVRWDPWESTA
FYVSLENGIVLNFDARVLPSDLTQPSPSRFMLAAHNGAASALDVNPHIRGCIVTGGTDKM
VKVWNINDKDNGKKDVSLVTSHDLGVGKVFSATFSPDDPLTIAAAGSKAKLQIWDVGANV
GARKAFAQKLKEAGREVRQKEGGGVVGVVSDDEEVSGDEDE
NT seq 1746 nt   +upstreamnt  +downstreamnt
atgagcggcctcatttcatgcgtctcctgggtgaaacgaggcgtcgcagcgcagcatcca
caaaaatacaacctcgacgaacgcgagctcgagcgggtgagcaagcttgcacgcatagag
atcgaagatgcacgacaggagctcgaacgtgcacacgaagcggcaaaactgatgggccgt
ggagctgaaggtgcagaggcggatgatcggggcggtgaagatgaggacgagtgggtcgac
gaggacgaacaaatggatgtcgaagatcttgaaacgaaaaacaagaatgacgaagatgat
cttgcaaagtataatctggacgagtacgacaaggagtcgaagtccatagctgcgggtccg
tttagcaatatcaaagggctagtgtactacaaggataacgatgaagatccatacataact
ctaaacgaggatgacgaagagatagaacgcgaagaactcgaggtacttccaacagacaac
ctgctcgtagcagcgaagacagaagacgaaatttcacagctcgaagtgtacgtatacgac
gagactcaagaaaacctatacgtccatcacgacatcatgctccccgcattcccactctgc
ctcgagtggctcgacttccctcccgctggacggccttcatccaccacctccgcctccatt
ccaaataacaacaacatatccaacaaagcctcagaaatggccatcgacttagacaacaat
ccttcaccgtcaaaacaattcgggaactacatagccgtcggtaccttcgaccccgaaatc
gaaatctggtccctcgacacagtcgacgcactctacccagacagcatgctcggtcgacca
gacatcacatccgcacacgtccccaccccactcggcacaggcaagaaaaaacgcaagaaa
cagaaacaccgaccgacgagtacggcgcaccacgttgacgctgtactctccctcgcgtgg
aaccgcgcgcatcggaacttacttgcgagtgcgagtgcggatcggacggtgaagctttgg
gatttgtcgcgtgaacctagtgccactggggacggtgggggagcgattaggagttttgac
gtacataaggataaggtacagactgtgcagtggaatgagaaggaacctacggtgttattg
acggggagttacgatcggaccgtacgtacgtttgatacaagggcaccgacggcgggtgta
ggcgctgtggttggtgccgacgtggaagcagtccgatgggatccttgggaatctaccgcg
ttctacgtctccttagaaaatggaatagtactcaatttcgacgctcgcgtactgccatcc
gacttaactcaaccttcaccctcccgcttcatgctcgcagcacacaatggcgccgcatcc
gcactcgacgtaaacccgcacatacgaggatgcattgtcacaggtggtacagacaaaatg
gtcaaagtttggaacattaatgacaaggataatgggaagaaagacgtcagcctcgtcacg
tctcacgacctcggagtgggcaaagtcttctcagcaacgttctcaccagatgatcctctt
acaatcgctgcagcaggttcaaaggcaaaactacaaatctgggatgttggtgcaaacgtt
ggtgcacgtaaggcatttgcacagaagctcaaagaggcaggtcgtgaggttcgtcagaaa
gaaggcgggggtgttgttggtgttgtcagcgatgatgaagaggtcagcggagacgaagat
gaataa

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