Fomitiporia mediterranea: FOMMEDRAFT_152648
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Entry
FOMMEDRAFT_152648 CDS
T03132
Name
(RefSeq) PRP3-domain-containing protein
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
fme
Fomitiporia mediterranea
Pathway
fme03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FOMMEDRAFT_152648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fme03041
]
FOMMEDRAFT_152648
Spliceosome [BR:
fme03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
FOMMEDRAFT_152648
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP3
Prp3_C
BLUF
Motif
Other DBs
NCBI-GeneID:
18674049
NCBI-ProteinID:
XP_007263497
JGI:
Fomme1_152648
LinkDB
All DBs
Position
Unknown
AA seq
606 aa
AA seq
DB search
MSKRPLDSSGNGSATKKIKSDATPSPGPNSSTGLSADELIKQKRAEIAAKMAAMTGKKPN
FPAAPAPATNAQSAGIAAPKPTASSSATEDLARRVAEARKRVAEAQNKMSTKDNPYLVAA
AQAGKKKATPVEPSPQGAGLKMAAHPLLLDTSSPAPQSKKDKYKPMQPKFASIKANVRNT
PTATPPPLAVPSPKPEVKVNPYAAQDAAAGSFEGAAPKERTSRTFRFNQKGKYVAIASQI
RNDAQLEALKQRIAESARKAGLDGEFETVEKNIRREAPPEAEWWDMALLPNQNYDDLNAG
MAALRIRTGDSPITLYVQHPIKIPAPGDKDKAEIKPLILTKKEQKKMRKQRRQAELQDKR
DRIRMGLVPPDPPKVRLANLMKVLTSDAVQDPTRVEARVRREVAMRKHNHEKMNAERKLT
DGQRREKLENKKLEEEKKGLVGAVFKVRTLADPSHRFKVRKNAEQTNLTGIIIYHPQFSM
VYVEGAAKFIRQYKRLMLNRIKWTEAARARGEEEVEFEDADEGDMTGAGMSSAPKQSAQE
DEFGSASLNDNRCDLVWEGELRERAFKTFRPKSCPTDGTAKEALGPKMAGFWDQTKNWKP
EEVELF
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcgtccactcgacagcagtggaaatggctcggctacaaagaagatcaaaagc
gacgcaactccctcgcctggccctaactcgagtacaggtctatctgcagatgagctcatc
aagcagaaacgagctgagatcgcggccaagatggcggcgatgacgggtaagaagccaaat
tttccggctgcaccagcgccagctacgaacgctcagtcggccggtattgcggccccgaaa
ccaacagcaagttcgtcggcaactgaggatctcgcgcgacgcgttgcagaggcaaggaaa
cgagttgctgaggcgcagaacaagatgtcgaccaaggataatccatatctggtggcagcg
gctcaggccggaaagaaaaaggcaacccctgttgaacctagtccgcagggtgctgggctc
aagatggctgcgcatcctctcttacttgatacaagtagcccagcaccacagtcaaagaaa
gataaatacaagcccatgcagccaaagtttgcatcaatcaaggcaaatgtacgaaatact
ccgactgctacacctccaccattagccgtcccatctccgaaaccagaagtgaaagtaaac
ccctacgcggcacaagatgccgcagctggttcttttgaaggcgctgcaccgaaagaacgt
acttcacgcacgttccgattcaatcaaaagggaaaatatgtcgcgattgcaagtcaaata
cggaatgatgctcaactcgaagcactgaagcaacgaatcgctgagagtgcgcggaaggcg
ggtctggatggtgagtttgagaccgtggaaaagaatattaggagagaagcgcccccagag
gcggaatggtgggacatggctcttctgcctaatcaaaactatgacgatttgaatgcagga
atggcggcgctgcgtattcgtacgggagattctcccatcacactctatgtgcagcatcct
ataaaaatccctgcccctggcgacaaagacaaagccgaaatcaaaccgctcatactcaca
aagaaggaacagaagaaaatgcgcaagcaacgccgacaagctgaattacaggacaagcgc
gaccgaattcgcatgggacttgtgcctcccgacccacccaaagtccgcctcgcgaatctc
atgaaggtgctcacaagtgacgcagtccaagatcccacccgcgtcgaagcacgggtgcgg
cgcgaagttgcaatgcgcaagcataaccacgaaaagatgaatgctgaacgaaaacttacg
gatgggcaacgtcgtgagaagcttgagaacaagaagctcgaagaagagaagaaaggtctt
gttggtgccgtctttaaagtgagaacgctggccgatccttctcatcgattcaaagtacgc
aagaatgccgagcagacgaacttgacggggattatcatataccatccgcaattcagtatg
gtctacgtcgaaggagcggcgaaattcatccgacaatataaacgtcttatgttaaatcgc
ataaagtggactgaagccgctcgagcccgtggcgaggaggaagtcgagttcgaggacgct
gatgaaggagatatgacaggcgcaggcatgtcgagcgcaccaaaacagtcagcgcaagaa
gacgaatttggttccgcttcactgaatgataatcgttgtgatctggtgtgggaaggtgaa
ctgcgtgagcgtgcattcaagacatttcgtccgaagagctgcccgacggatggcacggcg
aaggaggcacttggaccgaagatggcaggtttctgggatcaaacgaagaactggaagcca
gaggaagtcgagctgttctag
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