Fomitiporia mediterranea: FOMMEDRAFT_152815
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Entry
FOMMEDRAFT_152815 CDS
T03132
Name
(RefSeq) DNA mismatch repair protein MutL
KO
K08734
DNA mismatch repair protein MLH1
Organism
fme
Fomitiporia mediterranea
Pathway
fme03430
Mismatch repair
fme03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FOMMEDRAFT_152815
03460 Fanconi anemia pathway
FOMMEDRAFT_152815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fme03400
]
FOMMEDRAFT_152815
DNA repair and recombination proteins [BR:
fme03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
FOMMEDRAFT_152815
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
18674080
NCBI-ProteinID:
XP_007263642
JGI:
Fomme1_152815
LinkDB
All DBs
Position
Unknown
AA seq
757 aa
AA seq
DB search
MDRPTSPEPDGPKPIRRLQESLINRIAAGEIIHRPSSALKELLENSLDAGSTSIRVTVKD
GGLKLLQIQDNGCGIRKSDLAILAERFTTSKLSTFSDLSSLRTYGFRGEALASISHVSQL
SVVTKTKTDSCAYKAHYLDGHLVPPKPGQSADPKPCAGNDGTTITAENLFYNTPARLAAL
RSSSEEYARILDVVTRYAVHNPSVAFVCKKAGSAGPDLSTPSKSTTKQAIRLLYGQTIAR
ELLSIKFSSKSPDHTTTSEEEEAMDIDDTDIIEGEGSWKGEALFTSANYHSKKMVFLLFI
NHRLVESTRIKRAVEGVYSTILPKGTSPFVYLSLEIDPRAVDVNVHPTKREVHFLDEEAI
ITRVSDEIQQALAGQGRSRVLEYQTQTLLTGGTLEASQRDKKDKGKASSQGTNDVEDDGD
HAAPSVTTAKQKAVYSKDKVRVSQADRKLDSMFPLINPTTQAPSTSERGGDKRKETGSPA
ESQTPPVRAARVQEIKESQCFLTSVKGLRSDVEKARHNFLTEIIQNHVFVGIVDLRRSLS
LIQHETKLYLLNHAALAEELFYQLGLRQFGNYSRMKLEPPPPIRHLVQLAVRTENERWKA
TGLDIEADEVVDRIVTKLIKNAAMLNEYFSMNITPEGTLTSLPLLLRGYTPDLARLPLFL
MRLGPQVCWTQERECFGSFLRELAYFYSPGDLATSTLGEGSEKAGEDDATKKAERWQVEH
VLFPTMRKYLLPPRTLLDRDVLQVASLPDLYRVFERC
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggatagaccaacctcaccggagcctgatgggccaaagccaattcgccgtctccaggag
tcactcattaatcgaatagcagctggagagattattcacagaccttcttctgcgctgaaa
gagctacttgaaaatagccttgatgctggatcgacttcaatacgtgtaacagtcaaggat
ggcggattaaagcttttgcaaattcaagacaacggatgcggcatacggaaatcagacctc
gcgatactagcagaacgattcacaacctccaaactttctaccttttccgatttgtcgtct
cttcggacatacggttttcgtggagaagcactagcatccatttcgcatgtctcacaactg
tctgtcgtgacaaagacaaagacagatagctgtgcatataaagcgcattatcttgacgga
catcttgttcctccaaagcctggccagagtgcagatccaaaaccatgcgctggaaatgat
ggtaccaccataaccgcagaaaacctcttctataatacacccgctcgtcttgcagcactg
cgaagttcatcagaggaatacgcgcgaatacttgatgtcgttacgagatatgctgttcat
aatccgagcgttgcctttgtctgcaaaaaggctggctccgcaggaccagatctctcaact
ccttcaaaatcaacaacgaaacaggcaattcgccttctctatggccaaacgatcgcccgt
gaactcctgagcataaagttctcgtccaagtctccagaccacacaaccacatcagaagaa
gaagaagcaatggacatcgatgacaccgacatcatcgaaggagaaggtagctggaagggt
gaggcactgtttaccagtgcgaactatcactcgaagaagatggtcttcctgctatttatc
aatcatcgacttgttgagtccacacgtattaagagggctgttgaaggcgtttatagtaca
attcttccgaagggaacctccccatttgtctaccttagccttgagatcgatccacgtgct
gttgacgttaatgtgcacccaacgaaacgcgaagtccacttcctcgatgaggaggcaatc
ataacgcgtgtttccgacgagattcagcaagctttggcagggcaaggacggtcaagagta
cttgaataccagacgcagactcttttaactggaggtacattagaagcaagtcaaagagac
aagaaggataaaggcaaagcatcatctcaaggaaccaacgatgtcgaagacgatggcgat
cacgcagctcccagcgtgacgaccgccaagcaaaaggccgtgtactccaaggataaagtt
cgcgtatcacaggcagataggaagctcgattccatgttccccttaatcaacccaacaacg
caagcaccctcaacctcggaacgtgggggagacaagcgcaaagagactggttcacccgcg
gagtctcaaacgcctcccgtaagggctgcacgtgtgcaagagattaaagagagccaatgt
ttcctgacgtcagtaaagggactccggtcggacgttgagaaagcccgtcataatttctta
accgagatcatacaaaaccatgtgtttgtcgggatcgtcgacctccgacggtccctttca
ctaattcagcacgagactaagctatatttattgaaccatgctgcacttgcagaagagcta
ttctaccaattgggcctacgccaatttggtaattactcgcgcatgaaactcgaaccgcca
cctccaatccgacatctagttcaacttgcggtacgtacagagaacgaacgatggaaggcc
actggtctagatatcgaagcagatgaagtcgttgatcgcatcgttacaaaattaatcaag
aatgccgcaatgctaaacgaatatttttcaatgaacattacacctgaaggaaccctaact
agcctacctctccttttacgcggatatacaccagatcttgctcgtctcccactcttcctt
atgcgactcggacctcaagtctgctggacgcaagaacgtgaatgctttggctcatttctt
cgcgaactagcatatttctacagcccgggagacctcgcaacttctacgttgggggaggga
tccgagaaagcgggtgaggatgatgcaacaaagaaggcagagcgctggcaggtcgagcat
gtgttgttccctactatgcgaaagtatttactcccaccacgtaccttattagaccgagat
gtcctgcaagtagcaagcttgccggatctgtaccgtgtttttgaacggtgttga
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