Fomitiporia mediterranea: FOMMEDRAFT_153055
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Entry
FOMMEDRAFT_153055 CDS
T03132
Name
(RefSeq) DEAD/H helicase
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
FOMMEDRAFT_153055
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
WHD_HRQ1
Helicase_C
ResIII
MZB
CDT1
T6SS_VasJ
Motif
Other DBs
NCBI-GeneID:
18674116
NCBI-ProteinID:
XP_007263867
JGI:
Fomme1_153055
LinkDB
All DBs
Position
Unknown
AA seq
1108 aa
AA seq
DB search
MSRQSSVPDDPPPSAIRQAKRKNSPSTPGPSVGTPEGDVPETTKRVRTTSAKSQSKVQSQ
NNWPEYFVELYKVFKALNTVLAFCSSRKHLAITFPVVRSSVEALLKKQLEKVVELKALLP
DLIRFAYIPRDQLRINAESQGEADKKSKGRGGSPDYSAFTVGSSSAGFSHATPHEDEHVL
VLDFAAAKGTGKKPDAPAFAYQLAPSLSPAAVKKLIEKRNQRFEHSVNELLDATPDSDNP
AYLIQSAARDHIPVNPNVIKEEDVSETGRTKEVPGPTDRDSIDTILQEIMASEWYKDQIV
DRRVFHEKEGRLGTLAVPVSNSIMQALRSSRKISSFYSHQATAIDAIREGKNVIVSTSTA
SGKSVIYQVPMLRFLEEDPNAKALYIYPTKALAQDQRVALEQLLWSCEGLEHVKVANYDG
DTPMEQREGSIRTSSSVIFTNFDMLHASILPHEENWRQFFKALKLVAVDELHYYSGVFGT
HVAYIIRRLRRICAAVGNRRIRFVSCSATISNPFQHMKSIFGVDNIEVITDDGAPSGRKD
FLIWNPPPNDPMDPTLGRHSTLVESTSLMRFLMKKGVRTILFCKYRKMCELAMKTLRQDL
SAEGRHDILKRVMAYRGGDVSNLVYQPAKFMYKLTSTNVIGYSQKDRRKIEHEAFSGNLL
GIVATNALELGVDIGALDAVIMLGFPLGIASMRQQAGRAGRRARDALAVLVADSLPLDQY
YVQNPNDLFDSNVDDLLIDLDSKVIIEAHLHCAAFEMPLTEEDSAYFGPRLDKICQASLT
RDKDGWYHPNPKFLPYPSKHVSIRGIQEDIYTVIDTTDVSQGGSAKLLEEIEVSRAMFEA
FEGAVFMHQGMTYIVTEVSHDSRIAKIIRADVNWTTKPRDFTNIDALKTTRIREIKGSTI
RAYYGSIELKTVVFGYFKIRNNVILDTVGLEMPPFERNTTGFWIDLPKSTLEILRRKGIN
AAEAIHSAEHAFLNRFPMSADVGTECKVAVKEYNAADSKRKRPASAGTQGAIAAKAFDHV
SDLMHDAFETVESCDCGDGCDKCIRSAFCREHNLVYSRIGAQIVIRGILGLPIDVQAIPE
GTSDGVDSIIQADPVRVADGVQVEYYAD
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgagcagacaatcatctgttcctgacgacccgcccccgtctgcaatcagacaagcaaaa
cgcaagaacagcccatccactcccggaccgtcggtaggaacaccagaaggcgatgtgcca
gaaacgactaagagagttcgtacaacaagcgcaaaaagccagtcaaaagtgcagagtcag
aataattggcccgaatatttcgttgagttatacaaggtcttcaaggcactcaatacagtg
cttgcattctgctcgtctcgaaaacatcttgccatcacatttccggtcgttcgctcctct
gtagaagctcttctcaaaaagcaactggaaaaagtcgtggaactcaaagctctgttacct
gatctcatccgatttgcttacattccccgtgaccaactgcgtataaatgccgaatcccaa
ggtgaagctgacaagaaaagcaaaggccgtggcggttctcctgactattcagctttcact
gttggaagtagctctgctggcttctcccatgccacacctcacgaagatgagcatgtcctt
gtgttggactttgctgcggccaaaggcaccgggaagaaacctgacgctcctgcgtttgcg
taccagctcgcaccatctctaagtccggccgccgtcaagaagctcattgaaaaacggaac
caacgttttgagcactctgtgaatgagcttcttgatgcaacaccagactctgataatccg
gcctatctcatacaatctgcagctcgtgatcatatcccagtaaatccgaatgtcatcaag
gaagaagacgtttcagaaaccgggcgtaccaaagaagtgccaggtcctactgaccgagac
agcattgacactattctccaggagatcatggcgtcagaatggtacaaagatcaaatagtg
gaccgacgggtgtttcatgagaaggagggccgattaggaacactggcagtcccagtgtca
aacagtatcatgcaggctctccggagctcaagaaaaatatcttcattctattcccaccaa
gcaacagcaattgacgcgattcgagaaggaaagaacgtgattgtctctacaagtactgca
tctggcaaaagtgtaatctatcaggtcccgatgttgaggttcctggaggaggatcctaat
gccaaggcgctgtacatctacccaacaaaagcactagcgcaggatcaacgagtcgctttg
gaacagctactgtggtcctgtgaagggcttgaacatgtcaaagttgcgaattatgacggc
gatacacctatggaacaacgagagggtagtataagaacctcgtcatccgtaatattcacg
aacttcgacatgttgcacgcgtccatcttgcctcatgaagagaattggcggcagtttttc
aaggcattgaagctagttgcagttgatgagctccattattattcgggagtctttggaacg
cacgtggcgtatatcattcggagactccgtagaatatgtgcagccgtcggcaatcgaagg
attcgctttgtgtcgtgcagcgcaacgatttccaatcccttccagcatatgaaaagtatt
ttcggtgtagataacattgaggttatcacggacgacggtgctccttctggaaggaaggac
tttcttatctggaacccacctcctaatgatcccatggatcccacattgggccgacatagc
actttagtagaatccacaagtctcatgcgatttctcatgaagaagggtgtcagaacaatt
ctattctgtaaatatcggaagatgtgcgaattggcgatgaaaacattgaggcaagacttg
agtgcagaagggcgtcatgatatcctgaaacgcgttatggcttatcgcggaggtgatgtt
tcaaacttggtttatcaacctgcgaaatttatgtataaactaacctcaaccaatgtaata
ggttattctcaaaaggatcgtcgaaaaatagagcatgaggcgttctccggtaatttgctc
ggaattgtagcgacaaacgcacttgagcttggtgtcgacattggggcccttgatgctgta
attatgctcggctttcctcttggaattgctagtatgaggcaacaagcaggtcgagcgggc
cgaagagctcgggatgctctggctgtactagtcgccgactctctaccactggatcagtat
tacgtccaaaacccaaacgatctatttgacagtaacgtggatgatttgctcattgacctt
gatagcaaggtcatcattgaagcgcatcttcactgtgcggctttcgagatgcccttgaca
gaggaagattccgcgtacttcggtccccgtctcgacaaaatctgtcaagcgtcccttacg
agagacaaggatgggtggtatcatcccaaccctaaattccttccgtatcccagtaaacac
gtttcaatcaggggcatacaggaagacatctatactgttatagacaccacggacgtcagc
cagggtggaagtgcgaagcttcttgaagaaatcgaggtttcgagagctatgtttgaggca
tttgagggcgcagtgtttatgcatcagggcatgacttacattgttacagaagtcagccat
gattcgaggatagcaaagattatacgcgcggatgttaattggacgacaaaaccaagagac
ttcacaaacatagatgctctcaagacgactcgtattcgagaaatcaaggggtccacaatt
cgtgcatattacggaagcattgaactgaagacagtcgtattcggatacttcaaaattcga
aataacgtcatacttgacacagtgggtctagaaatgccgccatttgagcgaaacacgact
ggtttctggattgacttaccgaagtctacgctagaaattttgcgtcggaaaggaatcaac
gcagccgaagctatccacagcgcagaacatgccttccttaatcgatttccgatgtcagcg
gacgttggaaccgaatgcaaggtggccgtaaaggaatacaacgcagcagactccaagaga
aagcgtccagcgagtgcaggaacacaaggcgcaatagcagcgaaagctttcgaccacgtt
tctgaccttatgcacgacgccttcgagactgtcgaatcctgcgattgcggcgacgggtgc
gacaaatgtattcgaagtgctttctgtagagagcacaatctcgtgtactcgagaatcgga
gctcagattgtcattcgtggtatactcggactgccgattgacgtccaagctattccggaa
ggcacttcagacggagttgattcaattatccaggccgatcccgtcagagttgcagatggg
gtgcaagtggaatattatgcagactga
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