Fomitiporia mediterranea: FOMMEDRAFT_154732
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Entry
FOMMEDRAFT_154732 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K01166
ribonuclease T2 [EC:
4.6.1.19
]
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fme03016
]
FOMMEDRAFT_154732
Enzymes [BR:
fme01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.19 ribonuclease T2
FOMMEDRAFT_154732
Transfer RNA biogenesis [BR:
fme03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
FOMMEDRAFT_154732
Prokaryotic type
FOMMEDRAFT_154732
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_T2
DUF5892
Motif
Other DBs
NCBI-GeneID:
18674401
NCBI-ProteinID:
XP_007265237
JGI:
Fomme1_154732
LinkDB
All DBs
Position
Unknown
AA seq
271 aa
AA seq
DB search
MHMRPFLAGRLSLTPTLKITRRSMRPVTFARDYKWFSRDSLQDELAIGDEDRHDSPSDPS
PECTVWFYKLNSGIHTQILRKKVNFFQKNSWTIHGLWPDFCDGSFTQYCDLSRQFNPAPS
PNTTNSLPDSTVVPPYHGPGVDTFIVDFGRFDLLDYTSIAHEFSKHATSTSTFGIACYAN
YKEHEDVINFFDAVVCAFHMFLTYNMLAGWCHFLKQDNILNEMWHFSHVIGTEQYGRFKP
VDSTIALMCSEQGIHYLERTPTLQWDVRVDP
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcacatgcgtccttttctcgcaggacgactaagtctgacacccacgctgaagataact
cgacggtccatgcggcctgttacttttgctcgagactataaatggttctcacgggactct
cttcaggacgaactagccattggtgatgaagaccgtcatgattcgccttccgacccttct
cctgagtgtacggtttggttttacaaactcaattctgggatacatacgcagattttgaga
aagaaggtcaacttcttccaaaaaaatagctggacaatccacggactttggcccgacttt
tgtgacgggagcttcacgcaatactgtgatttatcaagacagtttaacccagcaccatcg
cctaacaccactaatagtctaccggacagtactgtagtccctccgtaccacggacctgga
gtggatacatttattgttgactttggtcgatttgacctacttgattatacaagcattgct
cacgagttttcaaaacatgcaacatccacatctaccttcggtatcgcctgctacgcaaac
tacaaagagcacgaggatgtaatcaacttcttcgatgcagttgtctgcgcatttcatatg
tttctaacgtacaacatgctcgccggctggtgtcatttcctcaaacaggacaacatccta
aacgaaatgtggcatttctcacacgtaattggaaccgagcagtacgggcgcttcaaaccc
gttgattcgacaattgcgttaatgtgttccgaacagggaattcattaccttgaacgcaca
cctactttgcaatgggacgtacgagtggatccctga
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