Fomitiporia mediterranea: FOMMEDRAFT_154950
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Entry
FOMMEDRAFT_154950 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K15147
mediator of RNA polymerase II transcription subunit 5
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fme03021
]
FOMMEDRAFT_154950
Transcription machinery [BR:
fme03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Middle
FOMMEDRAFT_154950
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med5
Motif
Other DBs
NCBI-GeneID:
18674431
NCBI-ProteinID:
XP_007265434
JGI:
Fomme1_154950
LinkDB
All DBs
Position
Unknown
AA seq
899 aa
AA seq
DB search
MHTPDLLTLPVFVFTFLEAAKSPNLHDTSTLDMLCRLIQDEHFALSLPPEQSLLNAQTYS
MPRVLEMVHGALNLVRVSYTSLSRSPFHDLISSASQLLMLLLSCVNDMTSISAGQAMMHY
AEVLEILQLQDLHGDLKAVLEPFALSLNMIMVDDSKMAQEAQLMQSLQLSISKGDILGPN
SESDIASCSLLLRHLVVNRTTTFGSGSPAAVAILVTAFRWTTWSPRIFYTQLFLAAISIL
SQSNSHKTNALIWRSFIITRLTRILSDFEQVLTADSVGESEWRGAIQAAFLSIQSRIDLL
SQCDTSATSRDVDDMNVDPPDSMRSSSVGSSTFFTSLIQYCALRTSLFDNSTRMMFKSTI
EPTLNTLLSNECQETGSTLDAYIESRLISDGNKEETLLPFLRRCVDDILNHPQIAKAVIK
RVETLCQQVDVEGLGVLCKTFNSLDVAMDIFSLHVRIDDILAPILAFIDDFDCESVGDPQ
TGLEYLGNVILFLQATLVKYQLSSHIFTLGDRVLATDYLLSTSTVFRMSSLGLEDVNVVK
AWSKALFDTNSEGIEDNILRTTKPKMLMKLTATLILQACNACADRRWSEDMLKNGVSYFT
GPLLNWTLVGGIKALLRDIMEKDFNTPIHLETLQTLVESSLCPKAVISLTGHGILALATD
PRASVIESKSPKLSFKAANLRAIASKALGIDDSESSDAKLKSLSIPSSHWLDQPRKSIRE
FFNAARAGRAPAFDVGRCVAVLGPTRFLRLLWDELDTPAKLGELEVSRRLATYVLLCPPA
ATGAGAGRTPPLLPIFLGSVLHGLLTRLDLKAPAEQTLGIELLVSVLTSSLTGLLHLEWA
LRAVGADTQIENHAYQPSVTIARRLAADLRRSKSPSAAIVIQRLSSSPSFVANFPVMAA
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgcatactccagacctgctgaccctgcctgtcttcgtgttcacatttcttgaagccgca
aaatcacccaatttgcacgatacttctactctcgacatgctctgtcggttaatccaagac
gagcactttgcattaagcttgccaccggagcagtcattactcaacgcgcagacttattca
atgccgagagtactcgaaatggttcatggcgccttgaatttagtccgtgtctcgtacacc
tcgctttcgcgttcaccgttccacgatctaatttcctctgcatcacaacttcttatgctc
ttgctttcatgcgtcaatgacatgacctctataagtgctgggcaggctatgatgcattat
gcagaagtgttggaaatattacaattgcaggatcttcatggagatctgaaagcagtccta
gaaccgtttgcattgtcactcaacatgataatggtggatgattcaaaaatggcccaagag
gcgcaactgatgcagtctcttcaactatcgatatccaagggcgatatccttgggccaaac
tcggagtcggatattgcatcgtgcagcttattgttgcgacatctggtcgtgaatcgcact
acaacatttggatctggttcacctgctgcagttgcaatactagttactgcattcaggtgg
acaacatggtccccgagaatattctatacgcagctttttcttgcggctatatcgattctt
tcccaaagtaactcgcacaagactaatgcccttatttggcgctccttcatcattacaagg
ttaacgcgtattctgtctgactttgagcaagtcctgacggccgactcagtaggagaatcg
gaatggcgaggagcaatccaagctgcatttttgtcgattcagagtcgcatagatttattg
agtcaatgcgatacgagcgctacctcgcgagacgtggatgacatgaacgttgaccctccc
gatagcatgcgtagctcatcagttggctcatcgacgttcttcacgtcgttaattcaatat
tgcgcacttcggacgagtctttttgacaatagtactcgaatgatgtttaagtcgacaatc
gagcccaccttgaatacgttattatctaacgagtgtcaagagactgggtctacattagat
gcgtacatcgaatcacgtcttatttccgacgggaacaaggaagaaacgctactccctttc
cttcggagatgcgttgacgatatcctaaatcatccgcagatagccaaggctgtaattaag
agagtcgaaacattgtgccagcaagtcgacgtcgaaggtctcggtgtactctgcaagact
ttcaattcccttgacgtggcaatggacatattttctttgcatgtcagaattgatgatatt
cttgctcccatccttgcatttatagacgactttgactgcgaatcagtaggcgacccgcag
actgggcttgagtacctcggaaacgtgattctgttcttgcaagcaacgcttgtgaaatac
cagttgtcatcacacatatttacgctcggcgatcgcgttctcgcaacggattatctgctt
tccacgtccaccgttttccgtatgtcatctctcggtctggaagacgtgaatgtcgtcaag
gcatggtccaaggctctgttcgataccaatagcgagggtatcgaagacaacatactcagg
actacgaaaccgaaaatgcttatgaagcttactgcaactttgatcttacaagcgtgtaat
gcatgcgcagaccgtagatggagcgaagatatgttgaagaacggcgtgtcatacttcaca
ggacccctactgaattggacactcgtgggcggaatcaaggcacttctacgcgatataatg
gagaaagatttcaatactcctatccacctcgaaacgctgcaaactcttgtcgagtcttct
ttgtgtcctaaagctgtaattagtttgaccgggcatggtatactggcacttgcgacagat
ccgagagcatcagttattgagagcaaatctccgaaattgtcattcaaggcggcaaacctt
cgagcaatagctagcaaggccctaggaatagatgatagtgaatcgtccgatgcgaagttg
aaatcgctctcaattccttcatcacactggcttgatcagccacgcaaatctatccgcgaa
ttcttcaatgccgctcgggcagggagggcacctgcctttgacgtcggacgatgcgttgct
gtgcttggtccgacacgttttctccgactgctctgggacgagctcgacacccctgctaaa
ctaggcgaactggaagtaagccgtaggcttgcaacttacgtgctactctgtccgccagca
gcaacaggagccggtgcaggacgcacaccgccgctgctaccaatcttccttggtagtgtt
cttcatggtcttttaacgcgtctggacttgaaagcaccagctgagcagacacttggcatc
gaattgctcgtgtccgtcctcacgtcctcgctgaccggcttgttacatctggaatgggcc
ttacgagctgtcggagctgatacacaaattgagaaccatgcataccagccgtctgtcacg
atcgcacgcaggttagctgcggacttacgaagaagtaaaagcccttccgcagctattgtg
atacagaggctttcttcatcaccttcattcgtggcaaacttccctgtgatggcagcatga
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