Fomitiporia mediterranea: FOMMEDRAFT_158350
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Entry
FOMMEDRAFT_158350 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K15202
general transcription factor 3C polypeptide 5 (transcription factor C subunit 1)
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fme03021
]
FOMMEDRAFT_158350
Transcription machinery [BR:
fme03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
FOMMEDRAFT_158350
TFIIIC, fungi type
FOMMEDRAFT_158350
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tau95
Tau95_N
Motif
Other DBs
NCBI-GeneID:
18674959
NCBI-ProteinID:
XP_007268495
JGI:
Fomme1_158350
LinkDB
All DBs
Position
Unknown
AA seq
542 aa
AA seq
DB search
MADETPGAGPSTITTTNEPAPEHPLPSNHYYAVEFPGNVQQASAGRAIEHLGGQSAINRA
FKRNAPKTDSLLELNWRPEDPFSHPIPGDVVHANNILLKVTKRKRKRRDGVDLPEPEGEF
VAEAVGIVPKTVRFRSMADFQYNPDTSDPVVQFRSAMDRMDVEYIRNYVIPPEKEDYELP
TTDPEDTDMQSDGVGPSSMTPRSNLRLIPPPVFSRQQIPQIYNYKANTMSVVTTYADPET
GEEKKRLINRARWKGYGPATVSFSDKTIPLGPPEAVAKATTESDKRILDLLKQRFDERPC
WTKTALFNQFNAGDSRELMNSKHLLPSVCYVFSDGPWRDTLLKFGYDPRAEPSARFYQRL
YFRNLNHPIVRPSIVTSRQDQRNADRQGSLPPPSQIGDSSAISSSNESPSHIFDGIHLTK
ETAAFQLCDIVDPMIKEMVEDEEGVRDECNERDGWYTTEAIDRIKTVLRHKFFSLLEGHI
PSEEECKALLENSQESRFSQRRVFQPRKHNMAKGALAPEDAAAVRLRAKLDIATKAALNR
NR
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgaaacacccggggcaggtccatccacaataaccaccacaaacgagccagcg
ccggagcatccactaccatcgaaccattattatgctgtcgaattcccaggaaatgtccag
caggcttctgcaggacgagctatagaacatctcggtggtcaatctgccattaaccgcgca
ttcaaacgaaatgcaccaaagacggattcactccttgaacttaactggaggcctgaggac
cctttctcccatcctataccaggggacgttgttcatgcgaacaacatcttattgaaggtc
acgaaacggaaaagaaagcggagggatggcgttgacttgccagagccggaaggtgaattc
gtcgcggaggctgtcggaattgtaccaaagacagtccgtttcaggagcatggcggacttc
caatataatccagatacatctgatcctgtagtccagtttcgttcggccatggaccgcatg
gacgtcgaatatataagaaactacgtgataccacctgaaaaggaggactatgagcttcct
acaaccgatcctgaagatactgatatgcaatccgatggtgttggcccgtcaagcatgaca
cctcggagcaatcttcgccttatacctccaccagtcttctctcgtcaacaaatcccgcag
atctacaattacaaggcaaatactatgtcggtggtcacgacttatgctgacccggagact
ggcgaggagaaaaagcgccttattaatagagcaagatggaaaggatacggacctgcgact
gtttcgttttctgacaagacgatacctctcgggcctcctgaggctgtggctaaagcaacg
acggagtctgacaaacggatactggatctcttaaaacagaggttcgatgagcgcccgtgt
tggacgaagactgcacttttcaatcagttcaatgcaggagactcccgggaactcatgaat
tctaagcacttgttaccctctgtgtgctatgttttctctgacggaccttggcgagataca
ctgctaaagtttggatacgacccgagggctgaaccttctgcacgattttatcagcgtctt
tacttccgcaatctcaatcatccgattgtgcgaccatctatcgtcactagtcggcaggac
caacgaaacgcagatagacaaggatcactacctccgccgtctcagatcggtgactcgagc
gcaatttcatcaagcaacgaatcaccatcgcatatcttcgatggaattcatttgacgaag
gaaacggctgcctttcaactctgcgacattgttgacccgatgataaaggagatggttgaa
gatgaagaaggcgtccgagacgagtgcaatgagcgtgatggatggtacacgacagaagct
atcgatcgcatcaagactgttcttcgacacaaattcttctcattgcttgaaggccacatc
ccaagtgaagaagaatgcaaagcgcttctcgaaaatagccaagaatctcgcttcagccaa
agacgtgttttccagcccaggaaacataacatggccaagggagcgttggcgcctgaagat
gctgcggccgttcgtttacgcgcgaaactagatattgccacgaaagcagcattgaacagg
aaccgataa
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integrated database retrieval system