Fomitiporia mediterranea: FOMMEDRAFT_158374
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Entry
FOMMEDRAFT_158374 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K12194
charged multivesicular body protein 4A/B
Organism
fme
Fomitiporia mediterranea
Pathway
fme03250
Viral life cycle - HIV-1
fme03272
Virion - Hepatitis viruses
fme04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
FOMMEDRAFT_158374
03272 Virion - Hepatitis viruses
FOMMEDRAFT_158374
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
FOMMEDRAFT_158374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fme04131
]
FOMMEDRAFT_158374
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fme04147
]
FOMMEDRAFT_158374
Membrane trafficking [BR:
fme04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
FOMMEDRAFT_158374
Exosome [BR:
fme04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FOMMEDRAFT_158374
Exosomal proteins of other body fluids (saliva and urine)
FOMMEDRAFT_158374
Exosomal proteins of colorectal cancer cells
FOMMEDRAFT_158374
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Snf7
YflT
Imm52
S_4TM
DUF3138
Motif
Other DBs
NCBI-GeneID:
18674962
NCBI-ProteinID:
XP_007268520
JGI:
Fomme1_158374
LinkDB
All DBs
Position
Unknown
AA seq
251 aa
AA seq
DB search
MSGFMSYFGGRKDPKQTTREAIVTLRQQLQMLEKKEEHLQKKVEEEMKKARANAVTNKQA
ATAALRRKKATEQELDRLAGTRLQLEMQVNTLESANFNQETMTAMKKGSDALKAIHGNLC
VVAVACCARLRSARPYSLTHLLISFLPPFFSRWIFRTPDKVDSTMQAINEQREIANEISD
AISNPMNTGDELKLELQELEQDELNERLAGAERAPTTALPSVAREEPMRKQLVEEDDEEA
QLKELQAALAM
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggtttatgagctacttcggtggtcgaaaggaccctaaacagaccacccgcgaa
gcaatagtcacgcttcgccaacaactgcagatgctggagaagaaagaggagcatctacag
aagaaggttgaggaggagatgaagaaggcgagagcaaatgcggtcactaataaacaagcc
gccactgccgcattacgacggaagaaggctacggaacaagaactcgatcgattagcaggg
acacgtctgcagctcgaaatgcaggtcaacacgttagaatctgcgaactttaaccaggaa
actatgactgcgatgaagaagggctcagacgcactcaaggcgattcatggtaatttgtgc
gtcgtcgccgttgcttgctgcgctagactgcgatctgcgcggccatattcgttgactcat
ttacttatttcatttctcccgccatttttttcccgttggatcttcagaacaccggataag
gttgactcgacgatgcaagctatcaacgaacaacgcgagattgcgaacgaaatatcggat
gcgatttcaaatccaatgaatactggtgacgaactcaagttggagctgcaagagctggag
caagacgagctcaacgaacgtctggcaggcgccgagcgcgctccgaccacggccttgcct
tcggtagcaagagaagaaccaatgcggaagcaactggtggaagaagacgacgaagaggca
caactcaaggagttgcaagcggctttggctatgtag
DBGET
integrated database retrieval system
