Fomitiporia mediterranea: FOMMEDRAFT_158806
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Entry
FOMMEDRAFT_158806 CDS
T03132
Name
(RefSeq) cysteine proteinase
KO
K11870
ubiquitin carboxyl-terminal hydrolase 1 [EC:
3.4.19.12
]
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
fme01002
]
FOMMEDRAFT_158806
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fme04121
]
FOMMEDRAFT_158806
Enzymes [BR:
fme01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
FOMMEDRAFT_158806
Peptidases and inhibitors [BR:
fme01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
FOMMEDRAFT_158806
Ubiquitin system [BR:
fme04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
FOMMEDRAFT_158806
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
Motif
Other DBs
NCBI-GeneID:
18675007
NCBI-ProteinID:
XP_007268930
JGI:
Fomme1_158806
LinkDB
All DBs
Position
Unknown
AA seq
1110 aa
AA seq
DB search
MQDRFRTLLARLSPLSAHFNSYSSSEYSYAYSNKYSSNNAGFYLYLLVQVAPLLVLLGLP
ALALFFLHCARRRTSGSAVRRLGGKLVWFVCMVLETVFGVAIPLPWGWGAGSGNADANSG
EGKAGDDKEKRKKRKEKGWRKRRSSQSTEVPDKESEESDDDEDLYYPGLVNISGTYCFLN
SVLQATASLAYLQPYLDAIHTRAVDLDVPTPVVDTLQGTLQALNTPKSSRSSLRPVPMIN
ALSQPAPGTRGRSKLFASREHQDAQELFQLLSECIKSEAQAVDAEAQRDRGLGSFASSSS
SASSSSSLSSSSTLRGTDDGEVELSSTGVFDGLTANRRSCVACGYTEAVMHFAFATWSLA
LPAAGFGGSCALQECLSEYTRLELLTDCVCRRCSMRATYARVREEAERLAEVTRAGGPSA
TSQYKKKKAREARRMEKLVSAAIEAGRIEEDIRGVKMERVISSASTKQAMIARPPKILVL
HLNRSLHFGGPYSSRNPIRVLFPEILDLTPYTTSGQLCTAPSSPISPPPPPTVLSIPRST
TPTQGLYTTPRVLYRLSAVVAHYGAHSFGHYVCFRRKPRVSRKGSWTSGTAKMGQPSVPQ
MPCPYGCECTLCTTYGPVRDSPTSSSTSDNTDCEAKLPTYRPPKPGKGWLRISDDAVEEC
GMERVLAEGSGAFLLFYERVQVQNQSHPSSAFGLPQSYPYQQLQNASTVPSSSIRIDGIG
HPSGVGFGGGGGGGRGLGSIYQHLHLHNSNANARGTPRSSEETVRPADVLSSSTNSSPSP
SSSISIPSSISASERAASVSSSVSSSWSGSGSGWRDREKTVRPRVVRRTTAGRRERSREV
EERVKGKENESEKGKGKGKGKGKEEEVLVNEEDKKDEVTKNEEGDGASLEGSKPTIDSIR
FTHSTENGSKPDGNGSAIPLSLPNCPSNELDGDARQVGTGEVDLDSVSLLSESIVKVELP
LPSPPRTPSPGPGPDAMSNPRRDTEKEKSLSSPVRNSTNPASLPSSSSSQPQPQNGQRPT
QIQTPRTPSPTPSPIPSTPSPPPSPAKRKTAKNRARAARKHSTNPTSSPSVSSNTSANSS
SNSGGSGMLSRPSPADRAAAPVPAAVGLRA
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaccgcttccgtaccctcctcgctcggctctcccctctttccgctcactttaat
tcatattcatcatccgagtactcatacgcatactccaacaagtatagctcgaacaacgcg
ggtttttatttgtacctgctagtgcaagttgcgcccctacttgtccttctcggactccct
gcgcttgcgctgttcttcctccattgtgctcggcggcgcacgagtggatctgctgttcgg
cgtttgggaggaaagttagtgtggtttgtgtgtatggtccttgagacagtctttggcgtc
gcgattccgctcccgtggggatggggcgctggttctggtaacgcagatgctaatagcggt
gaaggcaaagctggggacgataaggagaagagaaagaagaggaaggagaaggggtggagg
aaacgtaggagtagtcagtctacagaagtgccagacaaggagtcggaagagtcggatgac
gatgaagacttgtactatcccgggcttgtcaatatctctgggacatactgctttctcaat
tccgtgctgcaggctacggcgtccctggcatatctccagccgtacctcgacgcaatccac
acacgcgctgttgacttagacgtacccactcccgtcgtcgacaccctccaaggaactctc
caagcgctgaacacacccaagtcgtctcgctcttctctccggcctgtaccgatgatcaac
gcactatcgcagccagcgccgggcacgcgcggccgttcgaagctcttcgcatcgagagaa
catcaagatgcgcaagagctctttcagctgctttcggagtgtatcaagagtgaggcgcag
gctgtcgacgctgaggctcagcgggatcgtggactcggctcgtttgcttcgtcttcctcc
tctgcttcatcatcttcgtcattatcgtcgtcgtcgacgttaaggggcacagacgatgga
gaggtagaattgagttcaacgggtgtgtttgacggcttaactgcgaatcgaagaagctgc
gtcgcgtgcggatatacagaggcggtaatgcattttgcgttcgcgacgtggtcgttagca
ttacccgcagcagggttcggcgggtcctgtgctttacaagaatgtctttccgaatataca
agactggagttattaacggactgtgtatgtcgacgatgttcgatgcgcgcgacttatgct
cgggtacgcgaggaggcggagcgtttggctgaggtgacgcgtgctggtggaccgtctgcg
acgagtcagtataagaagaagaaagcgagggaggcgaggaggatggagaagcttgttagt
gctgctattgaggcaggaaggattgaggaggatattaggggtgttaagatggagagggtg
attagttctgcgtcgacgaagcaggctatgattgcgagaccaccgaagatcctcgtcctc
cacctaaaccgctccctccacttcggcggtccttactcctcacgcaacccaatccgcgta
ctcttcccagaaatcctagacttaacaccatatacaacctcaggccaactctgcaccgcg
ccttcctctcctatctctcccccgccaccaccgactgtcttgagcattccgcggagtacg
acgcctacacaggggttatatacgacgccgagagtgttgtataggttgagtgcggtggtg
gcgcattatggtgcgcattcgtttgggcattatgtttgttttcggaggaagccgagggtt
agtagaaaaggttcttggacgagtgggacggcgaagatgggacaaccgagtgtaccgcag
atgccttgtccgtatgggtgtgagtgtacgttatgtacgacgtacggacctgttcgcgat
tctccaaccagctcctccacctctgacaataccgattgtgaagcaaaactcccgacgtac
cgtccacctaaacctgggaaaggatggctccgaataagcgacgacgccgttgaagaatgt
ggaatggaacgtgtgttagcggaggggagcggcgccttcttgttgttttatgaaagagtg
caggttcaaaatcagagtcatccgagttcagcatttggacttccccagtcctatccctat
caacaactgcaaaacgctagcacggtgccgagttcgagtattcgaatagacgggattgga
catccaagcggagttggatttggtggtggtggtggtggtggtagagggttgggaagtata
taccaacacttacaccttcacaattccaacgctaatgcacgcgggacaccgaggagttct
gaagagactgttcgacccgcggacgtgctctcttcttcaaccaactcttccccttcccct
tcctcgtccatctcaattccctcttccatctctgcttccgagagggctgcaagtgtgagt
tccagtgtgagtagtagctggagtggatcggggagtggatggagagatagagagaagact
gttaggccgagagttgttaggaggacgactgcggggaggagggagaggagtcgggaggtt
gaagagagggtgaaaggcaaggagaatgaaagcgagaaggggaaggggaaggggaagggg
aaaggaaaggaggaggaagtgctggtaaatgaagaggataagaaagatgaagtgacaaag
aacgaggaaggagacggagcgtcgttggagggctcgaaaccgacgatcgactcgatccga
tttacacacagcacagagaacggaagcaagcctgatggaaatgggtcagcaatccctcta
tctcttccgaactgtccctcgaacgagctggacggggatgcgcgacaagtaggaactggt
gaagttgatttggattccgtatcgttgttatcggagagtattgtcaaagtggagttacct
ttgccttctcccccgcgtacgccgagtcctggtcccggtcccgatgctatgtcgaatccg
cgtcgagacacagagaaggagaagagcttgtcctcgcctgtacgaaattcaaccaaccct
gcttctctgccttcttcatcctcttctcaacctcaacctcaaaacggccaacgtccgaca
caaattcaaacaccccgtacaccatcacctacaccctctccgatcccttccactccctcc
ccaccgccctctccagctaaacgaaaaacagcaaagaacagagctcgcgcggcaaggaaa
cactcaaccaaccctacctcttccccttccgtttcgtcaaataccagtgcgaattcaagt
tcaaactccggaggaagtgggatgttatctagacccagtccagcagaccgtgcggcagct
cccgttcctgctgctgttgggttacgtgcataa
DBGET
integrated database retrieval system
