Fomitiporia mediterranea: FOMMEDRAFT_158814
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Entry
FOMMEDRAFT_158814 CDS
T03132
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fme03009
]
FOMMEDRAFT_158814
Enzymes [BR:
fme01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FOMMEDRAFT_158814
Ribosome biogenesis [BR:
fme03009
]
Eukaryotic type
90S particles
Helicases
FOMMEDRAFT_158814
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
Motif
Other DBs
NCBI-GeneID:
18675008
NCBI-ProteinID:
XP_007268938
JGI:
Fomme1_158814
LinkDB
All DBs
Position
Unknown
AA seq
305 aa
AA seq
DB search
MSPEVCIARQVLDEADRLLNPTFAPELEYLFNILPRERQTCLFTATMTESIKTLIAVPPR
PGKQKPFIHRMVAKVETVETLEQFYVLVPSHVREPYLFHLLCSPPESIIHMRCAPPEPAV
DPDAIEQPPPTIIFCARARTAAYLATLLQTLGIRSTPLHSRLTQRARLTALGLFRARVVP
VLVCTDVGARGLDVDDVALLVNWDMPQEPEEYTQLCRTNGTARADRDETAGDGCQKKLNA
VSTAKWLANMLEKKNFQAKSQPRVVYPYINHLLAELHDSDFGKREEIHKIKQAKRERVSA
PRSSS
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctgaagtttgtatcgcccgacaggtgctcgatgaggcagatcgactgcttaat
ccgacctttgctccagaactggagtatttattcaatattcttccgagggagagacagacc
tgtcttttcacagcaacaatgacagaatccataaaaactctgatcgcggttcctcctcga
ccaggaaaacagaagccgtttatacatcggatggttgccaaggttgaaaccgtagaaacg
ctcgaacagttctacgttctcgtcccatcgcacgtccgagagccctacctattccacctc
ctctgcagccctccagagagtatcatccatatgcgatgcgcacctccagaacccgctgtt
gacccagatgcaatagaacaacctccaccgacaataatattttgtgcacgggcacggaca
gctgcataccttgcaacgcttctacaaacactgggaatccgaagtaccccattacactct
cgtctcacgcagcgtgcacgtcttactgcacttggattattccgcgcacgcgtcgttccg
gtacttgtatgcacagacgtcggcgctcgtggactagacgtcgacgacgtcgcgctgctc
gtgaactgggacatgccacaagaaccagaagaatacacacaattgtgtcggacgaacggc
acggcgcgggcggaccgagacgaaactgcgggagatggctgccagaaaaagttgaatgca
gtctccaccgctaagtggcttgcgaacatgctcgaaaagaaaaacttccaagccaagagc
cagccgcgagtcgtttacccttacatcaatcatcttctagctgaactgcatgattcggac
ttcgggaagcgggaggagatccacaagattaagcaggcaaaaagggagcgtgtcagtgcg
ccaagatcctccagctga
DBGET
integrated database retrieval system
