Fomitiporia mediterranea: FOMMEDRAFT_160578
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Entry
FOMMEDRAFT_160578 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fme03021
]
FOMMEDRAFT_160578
Transcription machinery [BR:
fme03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
FOMMEDRAFT_160578
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
PIMT_C
Motif
Other DBs
NCBI-GeneID:
18675439
NCBI-ProteinID:
XP_007270306
JGI:
Fomme1_160578
LinkDB
All DBs
Position
Unknown
AA seq
724 aa
AA seq
DB search
MDVDEKHRKYTTPEQFLMRMQPKSIEDWLVNTVCGDCGGTIIEYDAAAGNGFCVGCGTVV
EENAIVSEVVFGESSSGAAIVQGSFVGQGATHARMGGPYGKRNTSESREQTIDNASRKIR
NVGALMRLSEVVQTAAIRMYTLALEHKFTKGRKNMNVIAVCLYIACRQKETRNYMLIDFS
DLLQVNVFDLGHTFLQLVQTLNLRLPLVDPSHYIARFAALLEFGDETPKVAADAVRLVAR
FDRDWMSRGRRPAGICGACLLLAARMNNFRRSVQEVVQVVKIADTTLKKRLDEFKNTPSG
ALTLADFRTVWLEDEMDPPAFIKGKEKEAKEKAKLLERESEEEEMEEEAEVEIQKEKGRR
KRKGKRKRSEEDDRESTVAPEAEAKTPEPVQPDELRPPIDPQLLNQGILAGTTDAPLFLP
ETADTTQNTPPSPTHVANGESSTDRTEKVEPENSEDDPIEEALLSEMNDFLHNPQGTRLT
DALSEAEQRRQSHFTGDDELLGLDDDELDAFLLSEEEVKIKERVWVEMNKDYLEALAAKE
AEKVGSAPTKTRKKRKTDNKPRDSSTPAGLTAVDAVRSMIKKSAKYSRRINYEALENLFA
SDTSGIQSGESNLLVPPKEVDLDVKAGDMFTIDQESIGGEGMDVVVEESGGGVGLRASPL
GANINGSRTESRLTDRGQAEGEGRGAVTEHTEEDGEVDGEGEEIELSEKGEDEYVWDEGY
EQEV
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggatgttgacgagaaacatcgcaaatacaccaccccagagcaatttttaatgcggatg
cagccgaaatcgattgaagactggttagtcaacacagtgtgtggtgattgcggtggaacg
atcatagaatacgatgcagcagcgggcaatggtttctgtgttggatgcgggacggtcgtt
gaggagaatgcgatcgtgtcggaagttgtgtttggagagtcgtcgagtggcgcggcgata
gtgcaggggtcgtttgtagggcagggtgcaacacatgcaaggatgggaggtccgtatggg
aagaggaacacttctgaatctcgtgaacaaaccatcgataatgcaagcaggaagatccgg
aatgtcggagctcttatgcgtctctcggaggtcgtccagacagccgcaattcgcatgtat
actctggctcttgaacataaatttacgaaaggacggaagaatatgaacgtcattgctgtc
tgtctttatatcgcgtgtcgacagaaggagactagaaactacatgcttattgatttctct
gacttgttgcaagtgaatgtattcgaccttggacatacattcctacaactcgtccaaacc
ctcaacctccgccttcctctagtcgacccatcacactacatcgcccgcttcgccgcactc
ctcgaattcggtgacgaaacacccaaagtagcagcagacgcagtccgcctcgtcgcgcgt
ttcgaccgagactggatgtcccgtggtcgtcgaccagcaggaatctgcggtgcttgttta
ctcctagcagcccgaatgaataattttaggagatctgtacaggaggtggtacaggttgtt
aagattgcggatacaacgttgaagaaacggttggatgagtttaagaatacgcctagtggg
gcgttgacgcttgcggattttaggactgtgtggcttgaggatgagatggaccctcctgcg
tttattaaggggaaagagaaggaagcgaaggagaaggctaagttgttggaacgcgagtct
gaggaggaggaaatggaggaagaggccgaggtggagatccagaaggagaaaggtaggagg
aagaggaaggggaaacggaaacgctctgaggaagatgatcgggagagtacagttgctcct
gaggcggaagcaaaaacacctgaaccagttcaacccgatgaacttagaccacccatcgat
cctcaactgcttaaccaaggtattctcgctggaacaaccgacgccccgctcttcctgcca
gaaacagcagatacaacgcaaaacacgcctccaagtcctacacacgttgcaaacggagaa
tcctcgaccgatcggacagagaaagtcgagccggagaattcagaagacgacccaatcgaa
gaagcactcctatctgaaatgaacgatttccttcacaacccgcaaggcacacgtctaaca
gacgcactctccgaagctgaacaacgtcgacaatctcatttcacaggcgatgacgaactt
ctcggtctagacgacgacgaactcgatgcgtttcttttgagtgaagaagaggtgaagatt
aaagagcgggtgtgggtggagatgaataaggattatttggaggctttagctgctaaggag
gcggagaaggtgggatcggcacctaccaagacgcgcaagaaacgaaaaacggataacaaa
ccacgagactcctcaacacccgcaggtctcacagccgtcgacgccgtacgaagcatgata
aagaaaagcgcgaaatatagtcgaaggattaattatgaggcgttggagaatctttttgcg
agtgatacttctgggattcagtctggcgagagtaatttgcttgttccaccgaaagaagtg
gacttggatgtgaaggcgggagatatgtttacgattgatcaggagagtattggtggagaa
gggatggatgttgttgttgaggagagtggtggaggcgttggtttacgtgcctctccgctc
ggcgcgaatattaatggatctcggaccgaaagtcggctcacggacagaggccaggcggaa
ggagagggtagaggagcggttacggagcatacggaggaggatggtgaggtcgatggtgaa
ggtgaggaaatcgagcttagtgagaagggtgaggatgagtatgtttgggatgaagggtat
gagcaggaagtgtag
DBGET
integrated database retrieval system
