Fomitiporia mediterranea: FOMMEDRAFT_16182
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Entry
FOMMEDRAFT_16182 CDS
T03132
Name
(RefSeq) ubiquitin-domain-containing protein
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
fme
Fomitiporia mediterranea
Pathway
fme03010
Ribosome
fme04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
FOMMEDRAFT_16182
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
FOMMEDRAFT_16182
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
fme03011
]
FOMMEDRAFT_16182
04121 Ubiquitin system [BR:
fme04121
]
FOMMEDRAFT_16182
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fme04147
]
FOMMEDRAFT_16182
Ribosome [BR:
fme03011
]
Ribosomal proteins
Eukaryotes
Small subunit
FOMMEDRAFT_16182
Archaea
FOMMEDRAFT_16182
Ubiquitin system [BR:
fme04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
FOMMEDRAFT_16182
Exosome [BR:
fme04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FOMMEDRAFT_16182
Exosomal proteins of colorectal cancer cells
FOMMEDRAFT_16182
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
TBK1_ULD
Dsc3_N
DUF2604
IBR
Ubiquitin_5
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
18675711
NCBI-ProteinID:
XP_007261488
JGI:
Fomme1_16182
LinkDB
All DBs
Position
Unknown
AA seq
160 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDVVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKRKKKTYNTPKKIKHKRKKVKMAILKYYKVDSDGKIQRLRRE
CPNAECGAGVFMAFHKDRQYCGKCNLTYTFQPGTKPPTAR
NT seq
483 nt
NT seq
+upstream
nt +downstream
nt
atgcagattttcgtaaaaaccctcacgggtaagactatcacccttgaggtggagtcctcc
gacaccatcgatgttgtcaagaacaaaatccaggataaggagggcatcccacctgaccag
caacgtctaatctttgctggtaaacagctcgaggatggccgtacgcttagcgactacaac
atccagaaggagtccacccttcatcttgtgctcagattgcgaggtggtgcgaagaagagg
aagaagaagacctacaataccccgaaaaaaatcaagcacaagcgcaagaaggttaaaatg
gccatcttgaaatactataaggtggactccgatgggaagattcagcgtctgcgtcgtgaa
tgcccgaatgcggagtgcggcgctggtgttttcatggccttccacaaagaccgccagtac
tgtgggaagtgcaacctcacgtacaccttccagcctggtaccaaacctccaactgcgagg
tga
DBGET
integrated database retrieval system
