Fomitiporia mediterranea: FOMMEDRAFT_162142
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Entry
FOMMEDRAFT_162142 CDS
T03132
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase
KO
K12736
peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:
5.2.1.8
]
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fme03041
]
FOMMEDRAFT_162142
03110 Chaperones and folding catalysts [BR:
fme03110
]
FOMMEDRAFT_162142
Enzymes [BR:
fme01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
FOMMEDRAFT_162142
Spliceosome [BR:
fme03041
]
Complex C
Other components
PPlases
FOMMEDRAFT_162142
Chaperones and folding catalysts [BR:
fme03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
FOMMEDRAFT_162142
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pro_isomerase
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WDR55
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
Beta-prop_WDR19_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_IP5PC_F
WD40_Gbeta
Motif
Other DBs
NCBI-GeneID:
18675769
NCBI-ProteinID:
XP_007271680
JGI:
Fomme1_162142
LinkDB
All DBs
Position
Unknown
AA seq
661 aa
AA seq
DB search
MSDAEASVLGKRERDAAAEDEANGNSNNVTEDSDDDIGPMPMPADAPEAQVIKKKRKVLP
HEKLYLSHLPSADRYAKSFMHRDVINFVVVTRGTDFVITTSIDGHLKLWKKQEVGIEFVK
HYRAHLQQVTGVSASVDGTLFASISEDGTAKVFDVVNFDMINMIKLGFVPHCCCWVHGKG
KAQALLAVSESNSGVIRIYDGRGDDKPLFVVDKVHRFPVHIMTARLLTRAVDKYNDRYDT
VVSADENGFIEYWQPFEPFELPKNVPRMWEYKSSTDLFEFKKAKATTTCIVLSPDNNSFV
TFSLPDRQIRIFSFISGKLTRRYDESLGAIQDMQQAGTSIYRIEDMEFGRRLAVDRELEL
PGPDGKVPGRWINAVWDESGNFVLYPTLLGIKVVNTVTNKVVRLLGKDETVRWMNLSLYQ
GAPAKKGRTTAAMAASANPILASKETRDPTLFCTGYKRQRFYMFTQTEPEDMKDQGDRDV
FNERPTRDEQTTASAAPVKASGPSPIAHAATIHTSEGDIHIRLFPEHAPKAVENFVGHAR
SGYYEGIIFHRVIPKFMIQTGDPLGDGTGGDSIWGREFEDEFTSALRHDRPYTLSMANAG
PNTNGSQFFITTTATPWLDNKHTIFGRVLRGLEVVHAIENVKTNKLDKPFEDIKIINVEV
E
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgctgaggcttctgtcttgggaaagcgtgagcgcgatgccgccgcggaagac
gaagcgaatggcaactccaacaatgtgacggaggacagcgacgacgacattgggccgatg
cctatgcctgctgatgctcccgaagctcaagtgataaagaagaaaaggaaggtccttccg
cacgagaaactctacctttctcatctcccgagcgcagatcgctacgcgaaatcatttatg
caccgcgatgtcatcaacttcgtcgtcgtcactcgcggaacagacttcgtaataaccacc
tcgattgatggacatctcaaattgtggaagaagcaggaagttggtattgaattcgtcaag
cattaccgtgcgcatttgcagcaggttactggcgtttctgcgagtgtggatgggacgctc
tttgcaagtatatctgaggatgggactgcgaaggtgtttgatgtcgtgaatttcgacatg
attaacatgattaaacttggcttcgttcctcattgctgctgttgggtacatggtaaggga
aaagcacaggctttacttgctgtttcagaaagcaactctggcgtgattcgtatttacgac
ggacgaggcgatgacaaacccctcttcgtcgtcgacaaggtccacaggttccctgttcac
attatgacagcgagactattgactagagcggtggataagtacaacgacagatacgacacc
gtcgtttcggctgatgagaacgggttcattgaatattggcaaccttttgagccattcgaa
ctaccgaaaaatgtacctcgtatgtgggagtacaaaagctccacggacttgttcgagttc
aaaaaggcaaaagccacaacaacgtgcattgtattgtcgccagacaacaactccttcgta
accttctcgcttcctgatcgccaaatacgcatattttccttcatctctggaaagctcaca
aggcgatatgatgaatcattgggggcgatacaggacatgcagcaggccgggacgtcgatc
tatcgcattgaagatatggaattcgggcgtagattggctgttgaccgtgagttggaacta
cctggacctgacggtaaagtaccaggacgatggataaatgccgtttgggacgagagtggc
aattttgtattatacccgactttgctgggaatcaaagtggtaaacacggtaacgaacaaa
gtggttcgcttgctaggaaaggacgagacagtgcgatggatgaacttgagcctgtatcaa
ggagcgccggcaaagaaaggccgtaccaccgccgcaatggctgcttcagcaaatcccatc
cttgctagtaaagaaacccgtgatccgactcttttttgcactgggtataaacgacagcgt
ttctatatgttcactcaaacggagccagaggatatgaaagatcagggtgaccgtgacgtc
ttcaacgaacggccaacgcgcgacgaacaaacgacagcctcagcagcacccgtaaaagct
agcggaccatcgccaattgcacacgctgcaacgatacacaccagcgagggtgacattcac
atacgactctttccagaacatgcgcctaaggcagtcgagaacttcgtcgggcatgcgcgc
agcggatattacgagggtattattttccatcgggttattccgaagtttatgatccagacc
ggagatcctcttggtgacggtacgggtggtgactcgatttggggaagggagtttgaagat
gagtttacgagtgctttgaggcatgataggccgtatacgttgagtatggcgaacgccggc
ccgaatacgaacggatcacagttctttatcaccactaccgcgacaccctggcttgacaac
aagcatacgattttcggtcgtgtccttcgaggcttggaagttgtacatgccattgagaac
gtgaagacgaacaagctggacaaaccgttcgaggatattaagatcatcaacgtagaagtc
gagtag
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integrated database retrieval system
