KEGG   Fomitiporia mediterranea: FOMMEDRAFT_162551
Entry
FOMMEDRAFT_162551 CDS       T03132                                 
Name
(RefSeq) DNA mismatch repair protein Msh6
  KO
K08737  DNA mismatch repair protein MSH6
Organism
fme  Fomitiporia mediterranea
Pathway
fme03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:fme00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    FOMMEDRAFT_162551
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fme03400]
    FOMMEDRAFT_162551
DNA repair and recombination proteins [BR:fme03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     FOMMEDRAFT_162551
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_II MutS_IV
Other DBs
NCBI-GeneID: 18675855
NCBI-ProteinID: XP_007271968
JGI: Fomme1_162551
UniProt: R7SGD1
LinkDB
Position
Unknown
AA seq 1254 aa
MAPKSQDTNGDGLKQKSLMGWFGKPNASSQTSSQQKSQKIISSQTQSANRKAIGGSNGTA
EKGGNVAKMESTMRPPKLASSTPGTSSTGALSSSFKSSSDPPNSGDTLPTSDAIDVDMQS
EDEVKVSNAKTAKRKMSIIDSDDEKISNTTRSAQASSEKDPSSPVLGARSKKPRVSLFES
DEEVEDTRGTLGKRLARFRKPGAAKKKTTNGYNSDSDFAPAEESDAEAPLTSNRGSSVSG
SRSELESSAVELDSADELSDAPKPKKKSGKSHRPALKKMQSSDAVRSGGSSTFLTAAEQR
AKDKKEEKKTTDDPFDFLRDVHDKDGNRPGEPGYDPRTLYIPKSAWKTFTPFERQFWEIK
ANHYDTVLFFQKGKFLELYEDDARIGHREFDLKLTDRVKMCMVGVPEGHFNTWAAKFLAK
GYKVGRVDQAETALGAEMRLAADKKLDKPKKEAGDKIVRRELNKVYTNGTLVDAELIVDD
QAGHCVSIRELDPDSDRGSFGVCVLDSSTSEFNLSAFGDDACRTKLETMLRQLRPKELLF
TKGNLSVSTTRLLKAVLPGSCIWTGLREVEGFGFKETMDELKNLYPDGEDDMEEGANIPD
AIKEMLTSETAVIALGAMIWYLRQLNIDKDILSMKNFNIYDPMKRGQGLVLDGQTLAHVE
VLQNSEGTDEGSLLRILQRCITPFGKRLFRIWLCVPLREVSAINARLDAVQDLIDHPTFE
HDFTQLAKGIPDLERIVSRIHAKNCKVNDFLKVLSSFKRLSNGLESLSETADTFNSREIS
GLLRSAPNLIPNIKHVESMFLQPEGGPDLLPKNGKDETYDGIEGEIQEIEESLDAELKKL
EKKLGCKLSYWHSATGTKDIYLVETKASVSNVPKNWIRQSKTKAVCRWQVPDLAQAIRQL
KEERERRTAAIKDFKFRVFAEFDKDRDVWLRAIRTLAELDCLFSLAKSSLAIGEPACRPE
FVEGDGAGALLDFEELRHPTMCLKADNFIPNDVKLGGGVGRVALLTGPNMGGKSTAMRMT
AAGVIMAQLGMLVPARRARISPVDAILTRMGAYDNMFSNASTFKVELDECCKILREATPR
SLVILDELGRGTSTYDGMAIAGAVLHQLATHTLPLCFFATHYGSLTDDFAYHPNIRNMHM
STIIDDEKCELVFLYKLVEGVAASSFGTHVANLAGVPMDVVKRAEVISTDFARQFKERIE
GKRTSVLPLTAQADFAYLYRLAGGSKGLPENKVKRMEVLRCLKGAVPRYLHASA
NT seq 3765 nt   +upstreamnt  +downstreamnt
atggcaccgaaatcccaggataccaacggagatggacttaagcaaaagagcctcatgggt
tggttcggaaagccgaatgcttctagtcagacttcgtctcagcagaaatcgcagaaaatc
atatcttctcaaacgcagagcgcgaatagaaaggcaatcggcggatccaatggaacagca
gagaagggtggaaatgtagctaaaatggagtctacaatgcgaccaccaaagcttgcatcc
agtacacctggcacgagctcgaccggtgctctaagctcgtcttttaagtcatcgtccgat
cctccgaactcaggtgatactcttcctaccagtgacgcgattgacgtggacatgcaatct
gaagacgaagtaaaggtgtccaatgctaaaactgcaaagcggaaaatgtcaattattgac
tctgatgatgagaaaatcagtaacactactcgttctgcacaagcttcttcggaaaaggat
ccttccagcccagttctcggtgctcgctcaaagaagccaagggtatcattgtttgagtcg
gacgaagaggtagaagacactcggggaacattgggaaagcgtttggctcggttcaggaaa
ccgggtgcggcgaaaaagaaaacaacaaacggctataactcggactcagatttcgctcca
gcagaagaatcagatgctgaagcgcctcttacctcaaatcgcggttcttcggtttctggg
tctcgcagcgagctcgagtcctctgcagtggagctagattcagctgacgaactctcagac
gctccgaaacctaagaagaaaagcggaaaatcccacaggcccgctttgaagaagatgcaa
tcaagtgatgcagtgcgatcgggtggcagcagcacctttttgacggcggctgagcaaaga
gcaaaggacaagaaggaagaaaagaaaacgactgatgatccattcgatttcctgcgggat
gtccatgataaagacggaaatagaccaggagaacctggatacgaccccaggacgttatat
atcccaaagtctgcgtggaagactttcactccctttgagagacagttctgggagatcaaa
gcaaaccattatgatactgtattattcttccagaagggcaaattcctcgagctgtatgaa
gacgatgcaaggattgggcatcgcgaatttgacctaaagctgacagatcgagtaaaaatg
tgtatggttggcgtacctgagggccacttcaacacttgggcagcaaaattcctcgctaaa
gggtacaaggttggacgcgtagaccaagcggagacagcgctgggagctgaaatgcgattg
gcggctgataagaaacttgacaagccaaagaaagaagctggtgataagattgtccgacgg
gaactaaacaaagtttatacaaatggaactctggtcgatgcggaacttatcgtcgacgat
caagctggacattgcgtgtcgatccgcgagctcgacccggattccgacaggggtagcttt
ggcgtttgcgtcttggactcctcaacttccgagttcaacctaagcgcatttggcgatgac
gcgtgtcggacgaagcttgagacgatgttaaggcagcttaggccaaaggagctcttattc
accaagggtaatctttctgtatccaccacacgtctattgaaagctgttctcccgggttcc
tgcatctggaccgggctgcgagaggttgagggattcgggttcaaggaaacgatggacgag
ctcaagaatctctatccggacggtgaagacgacatggaagagggagcaaacattccagat
gccatcaaagaaatgttaacgtccgagacggcggtgatagcactcggcgccatgatttgg
tatctgcgacagctgaatatcgacaaggacatacttagtatgaagaacttcaacatttac
gaccctatgaagaggggtcaaggattggtgttggacggacaaacactcgcccacgttgaa
gtgttacaaaatagtgagggtacagatgaaggttctctccttaggatcctgcagcgctgc
atcactccgttcggcaaacgcttgtttagaatttggctttgcgtgcccctccgagaagtc
tccgcgatcaacgctcgacttgatgccgttcaagacctgatcgatcatccaaccttcgag
catgattttactcaacttgcaaaaggaattccggatctcgagcgtatcgtttcacgcatc
catgctaagaactgcaaagtcaatgacttcctcaaggttctctcctcctttaagcgactt
agcaacggattggagtcgttgtcggaaactgcagatacatttaattcaagggagatttcg
ggcttgctcagatcagcaccaaacctcatcccgaatatcaagcacgtcgagagtatgttt
ttgcaacccgaaggagggcccgatctcctgccgaagaacggcaaggatgagacatatgat
ggtatcgaaggggaaatacaagaaattgaagagtcactcgatgcagagctgaaaaaacta
gagaaaaagcttggatgcaaactgagctactggcacagcgccaccgggacaaaggatatt
tatcttgtcgaaacgaaagcgtccgtatcgaatgttcccaagaactggattaggcaaagc
aaaaccaaagctgtatgtcgctggcaagtgccagacctagcacaagcgatccgtcagtta
aaagaagaacgggaaagacgaactgccgcaatcaaagacttcaaattccgcgtattcgct
gaatttgataaggaccgcgatgtctggctacgagcgattcgcacgcttgctgagctcgac
tgtctcttcagcctagcaaagagctcacttgctattggagagccagcctgtcgcccagaa
tttgtcgaaggcgacggagcgggtgccctgctggactttgaagagttacggcatcctact
atgtgtttgaaagccgacaacttcattccaaatgacgtgaaactaggaggtggcgttgga
agagtggcattattaactggtcctaacatgggaggcaaatcaactgcgatgcgtatgacc
gcggcaggagtcatcatggcgcaactcggcatgcttgtacccgccaggcgcgctcgcatc
tctcctgttgatgcaatcttaactcgaatgggtgcatacgataacatgttttccaatgcg
agcaccttcaaggtcgagttagacgaatgctgtaaaatccttcgagaagcgactcctcgc
tctctagttattttggatgaacttggtcgtgggacatcaacctacgacggcatggcaatt
gccggggctgtccttcaccaactagcaacgcatacgcttccactttgcttttttgcgacc
cactatggatcactcacagatgacttcgcatatcaccctaatatccgcaacatgcacatg
tcaaccatcatcgacgatgagaaatgcgagcttgttttcttgtacaagctcgttgaaggc
gttgcggcttcttcatttggcacgcacgtcgccaacctcgctggcgtaccaatggacgtt
gtgaaacgcgctgaagtcatctcgacagactttgcgcgtcagttcaaagagcgtattgaa
gggaagcggacctcagtactcccgcttactgctcaggcagatttcgcgtatctgtatcgc
cttgctggcgggagcaaggggctacctgaaaacaaggtaaagcgaatggaagtcctacgg
tgcttaaagggtgctgttccgcgctatctacatgcgtccgcttga

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