KEGG   Fomitiporia mediterranea: FOMMEDRAFT_164470
Entry
FOMMEDRAFT_164470 CDS       T03132                                 
Name
(RefSeq) AAA ATPase
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
fme  Fomitiporia mediterranea
Pathway
fme04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:fme00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    FOMMEDRAFT_164470
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fme03019]
    FOMMEDRAFT_164470
   03009 Ribosome biogenesis [BR:fme03009]
    FOMMEDRAFT_164470
   04131 Membrane trafficking [BR:fme04131]
    FOMMEDRAFT_164470
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:fme04147]
    FOMMEDRAFT_164470
Messenger RNA biogenesis [BR:fme03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     FOMMEDRAFT_164470
Ribosome biogenesis [BR:fme03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    FOMMEDRAFT_164470
Membrane trafficking [BR:fme04131]
 SNARE
  SNARE associated proteins
   Others
    FOMMEDRAFT_164470
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    FOMMEDRAFT_164470
Exosome [BR:fme04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   FOMMEDRAFT_164470
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N RuvB_N AAA_33 AAA_16 AAA_2 AAA_5 CDC48_2 TIP49 AAA_22 AAA_14 RNA_helicase Parvo_NS1 Mg_chelatase AAA_28 ATPase Vps4_C AAA_7 nSTAND3 NPHP3_N AAA_17 IstB_IS21 AAA_25 AAA_lid_PRS2_C AAA_18 AAA_24 DUF815 ResIII Sigma54_activat ABC_tran TsaE SLFN-g3_helicase PhoH NB-ARC KAP_NTPase Zot Molydop_binding
Other DBs
NCBI-GeneID: 18676151
NCBI-ProteinID: XP_007261471
JGI: Fomme1_164470
LinkDB
Position
Unknown
AA seq 814 aa
MADPSGAPPQPGPDDTSTAILRPKKSPNRLLVDDTTNDDNSVCTLHPNTMEKLQLFRGDT
VLVRGKKRRDTVLICLASEDGSVEEGKIQMNKVARNNLRVKLADLVHVSPLPDIQYGKRV
HILPFDDSIEGLSGNLFEVFLKPYFLEAYRPVRKGDTFKVRGGMREVEFKVIETDPAEYC
IVAQDTVIHTEGDPVKREEEEANLNDVGYDDIGGCRKQMAQIRELVELPLRHPQLFKSIG
IKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAE
KNSPAIIFIDEIDSIAPKREKTNGEVERRVVSQLLTLMDGLKARSNVVVMAATNRPNSID
PALRRFGRFDREVDIGIPDPTGRLEILRIHTKNMKLADDVDLEQIAAETHGYVGSDIAAL
CSEAAMQQIREKMDLIDLDEDTIDAEVLDALGVTMENFRFALGSSNPSALRETVVEVPTV
KWDDIGGLGKVKQELQETVQYPVEHPDKFIKYGMSPSKGVLFYGPPGTGKTLLAKAIANE
CQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVMFFDELDSIAKARGASAGGDA
GGAGDRVLNQLLTEMDGMNAKKNVFIIGATNRPDQIDPALLRPGRLDQLIYIPLPDEAGR
LDILRAALRKSPVAKDVDLTYLAKSTHGFSGADLTEICQRAAKLAIRQSIEEDIRRAREK
KESGDGDMEDVEEADPVPEITREHFEEAMKYARRSVSDQDIRRYEMFAQNLQQSRSFGTS
FRFPEGEPSATGGAAASSGNAAFGEDAQDDDLYA
NT seq 2445 nt   +upstreamnt  +downstreamnt
atggctgatcccagtggtgcccctccccagcccggacctgacgatacctcgaccgcaatc
ctgaggccgaagaaatcaccaaaccgcttgcttgttgatgacacgacaaatgatgataac
tcagtctgtactcttcatcccaacactatggagaaacttcaactgttccgtggcgacacg
gttctcgtccgcggaaagaagcgaagagacacggtgttgatttgcctggcgagtgaagat
ggctccgttgaagaaggcaagatacaaatgaataaggtcgcccgtaacaatttacgcgtg
aagctggccgatcttgtccacgtatccccattacccgatattcaatatgggaagcgagtc
catatcctcccgttcgacgactcaattgagggcctcagcggtaacctctttgaggtcttc
ctgaagccctacttccttgaagcttatcgacctgtgcgtaaaggtgacaccttcaaggtc
cgtggtggaatgcgtgaagtcgagttcaaggtcattgagaccgacccggccgaatactgt
attgtcgctcaagataccgtaattcatacagaaggtgatccagtgaaacgtgaggaggaa
gaggccaacctgaatgatgttggatacgatgatattggtggctgcaggaaacagatggcg
caaatccgtgaacttgtggagttgcccctccgccatcctcaattattcaaatccatcggt
atcaagccacctcgagggattctcatgtacggacctcccggtactggtaaaacgctcatg
gcgcgtgcggtggcgaatgagacaggcgcgtttttcttcttgattaacggtccggaaata
atgagcaaaatggccggcgaatccgaaagcaatcttcgtaaagccttcgaagaggccgag
aaaaactcacccgcgattattttcattgatgaaatcgactccattgcgccaaagcgagag
aagaccaatggcgaggtcgaacgccgagtcgtctcacagctcctcacactcatggatgga
ttaaaggcgcgttcaaatgtcgtggttatggcggcaacaaaccgcccgaactcaattgac
cccgcgcttcgccgtttcggacgcttcgatcgcgaagtcgatatcggtattcctgaccca
accggccgtcttgagattcttcgtattcacacgaagaacatgaagttagccgatgatgtg
gaccttgaacagattgctgccgaaacgcacggttatgtcggctctgacattgcggctctt
tgttcggaggctgccatgcagcagattcgcgaaaagatggacctcatcgaccttgatgaa
gacactatcgacgcagaggttttggatgctctcggtgtaacgatggaaaacttccgattc
gcgctgggttcgtccaacccatcggcacttcgcgagaccgtcgtcgaagtaccgaccgtc
aagtgggacgatatcggtggtcttggcaaagttaagcaggagttgcaagagacggttcaa
tatccggtcgaacaccccgacaaatttatcaagtacggtatgtcgccatcaaagggtgtg
ttgttctacggtcctccgggtactggtaaaacactgcttgccaaagctattgcgaacgag
tgtcaggcaaacttcatttcgattaagggtcctgaattgcttaccatgtggtttggtgaa
tccgaagccaacgtgcgggatgtgtttgacaaggcccgtgctgctgcgccctgcgtgatg
tttttcgatgagttggattccattgcaaaagcgcgaggcgcaagcgcaggcggagacgcg
ggtggcgctggagaccgtgttttgaaccagctgttgaccgagatggacggcatgaatgca
aagaagaacgtattcatcattggtgcgaccaacaggccagatcaaattgacccagcatta
cttcgtcctggacgtcttgaccaactcatttatattcctctgcccgacgaagctggacgt
cttgatatccttcgtgcagccctgaggaagtcgcctgtggcgaaggacgtcgatcttaca
tatcttgcaaagagtacgcatggcttctctggagctgatttgacggaaatctgccagcgt
gcagccaaactcgcgattcgccaatcaattgaagaggatatccgccgcgcccgcgaaaag
aaggaatcgggtgatggcgatatggaggacgttgaagaagcagatccagtgcccgaaatc
acccgtgaacactttgaagaggcgatgaaatatgctcgtcgctccgtgtccgaccaggac
atccgacggtatgagatgttcgcacagaatttacagcaatcgcgctcgttcggaacgtcg
ttccgattccccgaaggagaaccttcagctaccggcggtgcggcagcgagcagcggaaat
gctgcattcggggaggacgcgcaagatgacgatctgtatgcataa

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