Fomitiporia mediterranea: FOMMEDRAFT_164470
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Entry
FOMMEDRAFT_164470 CDS
T03132
Name
(RefSeq) AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
fme
Fomitiporia mediterranea
Pathway
fme04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
FOMMEDRAFT_164470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fme03019
]
FOMMEDRAFT_164470
03009 Ribosome biogenesis [BR:
fme03009
]
FOMMEDRAFT_164470
04131 Membrane trafficking [BR:
fme04131
]
FOMMEDRAFT_164470
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fme04147
]
FOMMEDRAFT_164470
Messenger RNA biogenesis [BR:
fme03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
FOMMEDRAFT_164470
Ribosome biogenesis [BR:
fme03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
FOMMEDRAFT_164470
Membrane trafficking [BR:
fme04131
]
SNARE
SNARE associated proteins
Others
FOMMEDRAFT_164470
Autophagy
Aggrephagy
Other aggrephagy associated proteins
FOMMEDRAFT_164470
Exosome [BR:
fme04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FOMMEDRAFT_164470
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_33
AAA_16
AAA_2
AAA_5
CDC48_2
TIP49
AAA_22
AAA_14
RNA_helicase
Parvo_NS1
Mg_chelatase
AAA_28
ATPase
Vps4_C
AAA_7
nSTAND3
NPHP3_N
AAA_17
IstB_IS21
AAA_25
AAA_lid_PRS2_C
AAA_18
AAA_24
DUF815
ResIII
Sigma54_activat
ABC_tran
TsaE
SLFN-g3_helicase
PhoH
NB-ARC
KAP_NTPase
Zot
Molydop_binding
Motif
Other DBs
NCBI-GeneID:
18676151
NCBI-ProteinID:
XP_007261471
JGI:
Fomme1_164470
LinkDB
All DBs
Position
Unknown
AA seq
814 aa
AA seq
DB search
MADPSGAPPQPGPDDTSTAILRPKKSPNRLLVDDTTNDDNSVCTLHPNTMEKLQLFRGDT
VLVRGKKRRDTVLICLASEDGSVEEGKIQMNKVARNNLRVKLADLVHVSPLPDIQYGKRV
HILPFDDSIEGLSGNLFEVFLKPYFLEAYRPVRKGDTFKVRGGMREVEFKVIETDPAEYC
IVAQDTVIHTEGDPVKREEEEANLNDVGYDDIGGCRKQMAQIRELVELPLRHPQLFKSIG
IKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAE
KNSPAIIFIDEIDSIAPKREKTNGEVERRVVSQLLTLMDGLKARSNVVVMAATNRPNSID
PALRRFGRFDREVDIGIPDPTGRLEILRIHTKNMKLADDVDLEQIAAETHGYVGSDIAAL
CSEAAMQQIREKMDLIDLDEDTIDAEVLDALGVTMENFRFALGSSNPSALRETVVEVPTV
KWDDIGGLGKVKQELQETVQYPVEHPDKFIKYGMSPSKGVLFYGPPGTGKTLLAKAIANE
CQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVMFFDELDSIAKARGASAGGDA
GGAGDRVLNQLLTEMDGMNAKKNVFIIGATNRPDQIDPALLRPGRLDQLIYIPLPDEAGR
LDILRAALRKSPVAKDVDLTYLAKSTHGFSGADLTEICQRAAKLAIRQSIEEDIRRAREK
KESGDGDMEDVEEADPVPEITREHFEEAMKYARRSVSDQDIRRYEMFAQNLQQSRSFGTS
FRFPEGEPSATGGAAASSGNAAFGEDAQDDDLYA
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcccagtggtgcccctccccagcccggacctgacgatacctcgaccgcaatc
ctgaggccgaagaaatcaccaaaccgcttgcttgttgatgacacgacaaatgatgataac
tcagtctgtactcttcatcccaacactatggagaaacttcaactgttccgtggcgacacg
gttctcgtccgcggaaagaagcgaagagacacggtgttgatttgcctggcgagtgaagat
ggctccgttgaagaaggcaagatacaaatgaataaggtcgcccgtaacaatttacgcgtg
aagctggccgatcttgtccacgtatccccattacccgatattcaatatgggaagcgagtc
catatcctcccgttcgacgactcaattgagggcctcagcggtaacctctttgaggtcttc
ctgaagccctacttccttgaagcttatcgacctgtgcgtaaaggtgacaccttcaaggtc
cgtggtggaatgcgtgaagtcgagttcaaggtcattgagaccgacccggccgaatactgt
attgtcgctcaagataccgtaattcatacagaaggtgatccagtgaaacgtgaggaggaa
gaggccaacctgaatgatgttggatacgatgatattggtggctgcaggaaacagatggcg
caaatccgtgaacttgtggagttgcccctccgccatcctcaattattcaaatccatcggt
atcaagccacctcgagggattctcatgtacggacctcccggtactggtaaaacgctcatg
gcgcgtgcggtggcgaatgagacaggcgcgtttttcttcttgattaacggtccggaaata
atgagcaaaatggccggcgaatccgaaagcaatcttcgtaaagccttcgaagaggccgag
aaaaactcacccgcgattattttcattgatgaaatcgactccattgcgccaaagcgagag
aagaccaatggcgaggtcgaacgccgagtcgtctcacagctcctcacactcatggatgga
ttaaaggcgcgttcaaatgtcgtggttatggcggcaacaaaccgcccgaactcaattgac
cccgcgcttcgccgtttcggacgcttcgatcgcgaagtcgatatcggtattcctgaccca
accggccgtcttgagattcttcgtattcacacgaagaacatgaagttagccgatgatgtg
gaccttgaacagattgctgccgaaacgcacggttatgtcggctctgacattgcggctctt
tgttcggaggctgccatgcagcagattcgcgaaaagatggacctcatcgaccttgatgaa
gacactatcgacgcagaggttttggatgctctcggtgtaacgatggaaaacttccgattc
gcgctgggttcgtccaacccatcggcacttcgcgagaccgtcgtcgaagtaccgaccgtc
aagtgggacgatatcggtggtcttggcaaagttaagcaggagttgcaagagacggttcaa
tatccggtcgaacaccccgacaaatttatcaagtacggtatgtcgccatcaaagggtgtg
ttgttctacggtcctccgggtactggtaaaacactgcttgccaaagctattgcgaacgag
tgtcaggcaaacttcatttcgattaagggtcctgaattgcttaccatgtggtttggtgaa
tccgaagccaacgtgcgggatgtgtttgacaaggcccgtgctgctgcgccctgcgtgatg
tttttcgatgagttggattccattgcaaaagcgcgaggcgcaagcgcaggcggagacgcg
ggtggcgctggagaccgtgttttgaaccagctgttgaccgagatggacggcatgaatgca
aagaagaacgtattcatcattggtgcgaccaacaggccagatcaaattgacccagcatta
cttcgtcctggacgtcttgaccaactcatttatattcctctgcccgacgaagctggacgt
cttgatatccttcgtgcagccctgaggaagtcgcctgtggcgaaggacgtcgatcttaca
tatcttgcaaagagtacgcatggcttctctggagctgatttgacggaaatctgccagcgt
gcagccaaactcgcgattcgccaatcaattgaagaggatatccgccgcgcccgcgaaaag
aaggaatcgggtgatggcgatatggaggacgttgaagaagcagatccagtgcccgaaatc
acccgtgaacactttgaagaggcgatgaaatatgctcgtcgctccgtgtccgaccaggac
atccgacggtatgagatgttcgcacagaatttacagcaatcgcgctcgttcggaacgtcg
ttccgattccccgaaggagaaccttcagctaccggcggtgcggcagcgagcagcggaaat
gctgcattcggggaggacgcgcaagatgacgatctgtatgcataa
DBGET
integrated database retrieval system