KEGG   Fomitiporia mediterranea: FOMMEDRAFT_164561
Entry
FOMMEDRAFT_164561 CDS       T03132                                 
Name
(RefSeq) pre-rRNA-processing protein IPI3
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
fme  Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:fme00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:fme03009]
    FOMMEDRAFT_164561
Ribosome biogenesis [BR:fme03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    FOMMEDRAFT_164561
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40_CDC20-Fz WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_WDR75_1st EIF3I Beta-prop_TEP1_C Beta-prop_VPS8 Beta-prop_HPS5 WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_WDR19_1st WD40_RFWD3 ANAPC4_WD40 DUF1192 Beta-prop_LRRK2 Lzipper-MIP1 Beta-prop_IP5PC_F DUF4391 Med21 DUF7310 TolA_bind_tri DUF7801
Other DBs
NCBI-GeneID: 18676163
NCBI-ProteinID: XP_007261587
JGI: Fomme1_164561
LinkDB
Position
Unknown
AA seq 511 aa
MRYQETILCSSGASSSSQGLGAVTVHDFNTGSLLVSFKQTCSEPHSTSILQTKNGQGGFI
LAAQPDKSILNAYYFQKDQIALKMVLPEKLSCIAIDKAGDYCAGGTAQGRIYLWEASQFP
VRIASGILVNVWDAHYRKVTVLRFTRDCAALISGSEDSGISVWSISSLLCNESQHETPTP
YCNLSDHTLPITDIVCGVGSFPACRLLTSSIDHSVKLWDLSSRTLLTTFLFPSPIHSLAF
ETAERTFFAASSEGTGPDAGGTVYQVKLFRRRDPENNGHGVEALGGGGVGEAIRLDADPK
RVIFVGQPISTLALSLTRSTLLVGTTTGEVNLYDIASHQLLRTISPVKDKGQGLSITHIE
CMLKPPDLIGHISLGLNVGGITSVKDVMPTRPIAPFQRVRDSKAREAHEVPIILPSQNEP
YVDPTIYTTEELLRDQAVFLQSHILPDANGGTQNSLLAQQTRLAELESEVQRLRTQLTKA
KNVNDAMWEAVAQRIVSDKKGSIATLPVNGS
NT seq 1536 nt   +upstreamnt  +downstreamnt
atgcgataccaggagacgatcttgtgctcctcgggtgcatcgtcctcaagccaaggattg
ggcgcagtcaccgtccacgacttcaacactggatctttgctggtctccttcaagcagaca
tgttcagagccccactccacttctattcttcagacaaaaaatggccagggtggattcatc
ctcgctgctcagccagataaatcaatcctgaatgcttactacttccaaaaagatcaaatt
gcgttgaagatggtcctaccagagaagctgtcctgtattgcaatagataaagctggagac
tattgcgcgggcggaactgcgcaaggccgcatctatctttgggaggctagtcaatttccg
gtccgaatcgcttccggtattctcgttaatgtttgggatgctcactatcgcaaagtcact
gtcctgcgtttcacacgagattgcgcggcgctcatatccggaagcgaggactcgggcatc
tccgtttggtccatctcaagtcttttgtgcaatgagtctcaacacgagactccgactccg
tactgtaacctgtcagatcacactttaccaatcaccgatattgtctgcggcgtcggttct
ttcccagcatgccgcctcttaacttcatcaatagaccattctgtaaaactctgggaccta
tcgtctcgtactcttctaacgacattcctatttccatccccgatacactcgcttgcgttt
gaaaccgccgagcgcacattcttcgccgcatcctcggaagggaccggcccagatgctggt
ggtaccgtatatcaggttaagctctttcgaaggcgtgatcctgaaaataacggacatggg
gtcgaggcattgggaggaggaggcgtgggcgaagctattcgtctcgacgcagacccgaag
cgcgtgattttcgttgggcaaccaatttcgaccctcgctctatctctgacgcggtctacg
ttactcgtcggtaccactacgggagaagtgaatctatatgacatagcgtcgcatcaatta
ttgcgtacgatttcgccggttaaagacaagggacaaggcctatctatcacccatatcgag
tgtatgctcaagccgccagacctgataggacatattagtcttggtctcaacgttggcggg
ataacgagtgtcaaggacgtcatgcctacgagacccattgcgccatttcaaagagtacga
gacagtaaagcacgggaagctcatgaggtccctattatactaccgtcacagaacgagcca
tacgttgatccgaccatttatactaccgaagagctcctgcgagatcaagcagtgttttta
caatcgcacatactaccggatgcaaacggcggcacgcagaattctctccttgctcagcaa
acacggctagccgaactcgaaagtgaagtgcagcgattacggacgcaacttacgaaagct
aaaaatgtgaacgacgcgatgtgggaagccgtcgctcagcgcatcgtgtcggacaagaag
ggttctatcgcgacgcttcctgttaacggctcctga

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