Fomitiporia mediterranea: FOMMEDRAFT_164723
Help
Entry
FOMMEDRAFT_164723 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K18723
nucleoporin GLE1
Organism
fme
Fomitiporia mediterranea
Pathway
fme03013
Nucleocytoplasmic transport
fme03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
FOMMEDRAFT_164723
03015 mRNA surveillance pathway
FOMMEDRAFT_164723
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fme03019
]
FOMMEDRAFT_164723
Messenger RNA biogenesis [BR:
fme03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
FOMMEDRAFT_164723
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
18676193
NCBI-ProteinID:
XP_007261829
JGI:
Fomme1_164723
LinkDB
All DBs
Position
Unknown
AA seq
605 aa
AA seq
DB search
MKISAPRTFYSARENKTPSSSGHFRAPSSYDSDSSEEDYLSSDEGDTSYDLDISVDSADA
QSDSADEDQDVEEDLIGPWNKLTISGRTPQEQHAVLETVASVRNHSRHVDPYEEWESQMR
RNAFLTARRQQASVLHEMREKQRQNHLKNQQQFNFIRTKELEFLQISMEKHRNITLNAEN
QLRERWKERDRKLWERIELAIKEEEDKLRATQEAERQAREENERKMREMEEKTKKEEEER
KKAEEEKRQKVVAEKLRRDMEETEKQEKEEKAKLDKTRVHGLLELREKSGLLSCEDMWKV
GLRCLKYLRSETMRAVKGPRPPDPEPAGYQAPPPPPLKKLWSAQRRKITPKIGQLTDDPE
QIARISEELKAIVAPIPNMPRPEEAQCLHHALLASFAKAVVAQAETEVTAHKAQAGPLAR
VAVSLISAYPALGDIFWARLCARAGCWAAGVEPEVVENEQWQTLPDKEKRKRWGAREDEN
LEEKMTRISGILRLYFSMMFISVTVPMKEPMPMAFRPARFWLYLSQLLDNQKMIEKPVAP
EIIYVALDEGGVHAKTIWGKQFIKMLQFIYEGIQGEDKQRFGGSDVLAQASRARCILEIE
KIMTQ
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataagtgcacctaggactttctactcagctagagaaaataagacaccaagctcg
agtggacactttcgagcaccatcctcatacgatagtgattcttcagaagaagattacctc
tcttccgatgaaggagatacctcatatgaccttgacatctctgtggactcagcggatgcg
cagtcagacagcgcggatgaagaccaagatgttgaagaggatctgattggtccctggaac
aagctcactattagtgggcgaacacctcaggaacaacacgctgtcttagagactgttgcg
tctgttcgcaaccactcgcgccacgttgatccttacgaagagtgggagtcgcagatgcga
aggaatgctttcctcactgcacgacgacagcaagcgtccgtgctccacgagatgcgtgaa
aagcaacgacagaatcacttgaagaaccaacagcaattcaattttattcgtacaaaggag
cttgaatttctacaaatatcgatggagaaacaccgtaacatcactctcaacgcagagaac
caactacgtgagaggtggaaagaacgtgacaggaagttatgggagcgtattgaactcgct
attaaagaggaggaagacaagctgcgtgctactcaagaggcggaacgccaggcacgggag
gagaatgaacggaagatgcgcgagatggaagagaagacaaagaaagaggaagaagagagg
aagaaggctgaggaagaaaagagacagaaagtcgtggcagagaagttaagaagggatatg
gaggagactgagaagcaagagaaggaagaaaaggcgaaattagataagactcgagttcac
ggtctgctcgaactgagggagaagtctggcttgctcagttgtgaagatatgtggaaagtg
ggattacggtgcctgaagtacttaagatcggaaacgatgcgcgcagtaaaggggccgagg
cctccggacccggaacctgcaggttaccaggcgccacctcctcctccattgaagaaacta
tggagtgctcaacgtagaaagatcactcctaagattggtcagctcaccgacgatcccgaa
cagattgcccgcattagtgaggaattaaaggctatcgttgcacccattccgaacatgcca
cgacccgaggaagcacaatgtctccaccatgccttactcgcttcttttgcaaaggcagta
gtcgctcaagcagaaacggaagtcacagcgcacaaagctcaagctggcccacttgcacgt
gttgccgtgtcactcatctccgcatacccagcgcttggtgacatattctgggcacgcttg
tgcgctcgtgcaggatgctgggctgcgggcgtggaacctgaagttgtagaaaacgagcaa
tggcaaactcttcccgacaaggaaaagcggaaacgttggggcgcaagggaagatgagaac
ctcgaggagaaaatgacgcgtatctcgggtatcttgaggctgtatttcagcatgatgttt
atctcggtgaccgttccgatgaaggagccgatgccaatggcttttaggcctgcccgcttc
tggctttacctttcccaactactggataaccagaagatgattgagaagccggtggcacct
gagattatttatgttgcgctagacgaagggggtgtacacgcgaaaacgatctggggcaaa
caattcattaagatgctccagttcatctacgagggaatacaaggcgaggataaacagcgc
tttggaggctcagacgtcctcgctcaggcctcgcgtgcccgttgcattctagagatcgag
aagatcatgactcagtga
DBGET
integrated database retrieval system