Fomitiporia mediterranea: FOMMEDRAFT_165377
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Entry
FOMMEDRAFT_165377 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fme04121
]
FOMMEDRAFT_165377
Enzymes [BR:
fme01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
FOMMEDRAFT_165377
Ubiquitin system [BR:
fme04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
FOMMEDRAFT_165377
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
zf-RING_5
zf_CCCH_4
zf-CCCH
Torus
zf-rbx1
zf-C3HC4_4
zf-CCCH_2
Inhibitor_I36
Motif
Other DBs
NCBI-GeneID:
18676303
NCBI-ProteinID:
XP_007262899
JGI:
Fomme1_165377
LinkDB
All DBs
Position
Unknown
AA seq
602 aa
AA seq
DB search
MAQRPPTTKPRGVCMYFRSGRGCRNGDMCKFLHGDGETLSPYDKSKVCRFYASGFCKHGS
KCWFRHESRPNTVTLTETEAGTSTRGVNPSEMNKEDQDKLCSICQEKPVTYGLLEDCSHV
FCLECIRGWRDPTGKSQDLLESGNTKKCPYCRASSNFVIPSSVYYSAEEPKKAIVIASYK
SSMARIPCKYFEMSPPNSRYCPFGRDCFYQHKEADGSPYVFDRGVDYYMSRRRRSNRLQN
ASISDLLSNIRASRTENDVLQLMEDLRARFDLTARGSTNDGEDSEVSHLAILLEDVLTNL
GEALMGTFTSSSEDGRPEEEERSTLSRPSILATPEDSSINSSLPLTRAFMDNNMSPDNFD
LIANMTESESDDGTDEGTSTQTFVPHSRIRSRSLPNLTNTWADELMSASDSRPDVAEGVY
GYSIDNRIDSTGIPTGEALSRDEQQQFPAVVESISISEGGGADSLGAQESSSQRGSDGPL
VMGRGTNDHHSSRITVTPSSGDEVQLHDREVRSKTDVRSEHVPRRIKSNTGGTSCSGRRN
GGQSFVTDGRGRVVATDDGAHTDDASLAFWSPSVPVAASPSAPTSETDGRLTEEAGALDD
LD
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggcacagcgtccaccaacaaccaagccgcgcggtgtatgtatgtactttcggtcaggg
aggggttgtcgtaatggcgacatgtgcaagttccttcatggtgacggcgagacactctcg
ccttacgacaaaagtaaggtatgcagattttacgcatcagggttctgcaaacatggaagt
aaatgctggtttcgtcacgaaagtagaccaaatacggtgaccttgactgaaactgaggct
ggaacatcaactcgtggagtaaacccgtctgaaatgaacaaagaagatcaggacaagctg
tgttccatctgtcaagagaaacctgtgacttacggtttgcttgaggactgtagccatgtc
ttttgtttggagtgtatccgtggttggagagacccaactgggaagtcacaagatctgctg
gaatcgggaaacacaaaaaaatgcccatattgtcgagcctcatcaaactttgtgattccc
agcagtgtatactactcagctgaagaaccgaagaaagcaatagtcattgccagctacaaa
tccagcatggctcgcatcccgtgcaagtatttcgaaatgtctccccccaactctcgttac
tgcccgtttggtcgagattgtttttatcagcataaggaagcagatggttctccgtatgtg
tttgaccgtggtgtagattactacatgagcagacgtcgacgcagcaatcgactgcaaaac
gcgtctatctcagatttactatctaatatcagggcatcgagaacagagaacgatgttttg
caattaatggaggaccttagagctcgctttgatctaactgctcgcggaagtactaatgat
ggcgaggactctgaagtttcacatcttgccattctcctggaagatgtgctcacaaatttg
ggagaggcacttatgggaacttttaccagctcgtcggaggacgggcggcccgaagaagag
gaacgatcaaccctatcgaggccctcaattctagcaactccagaagattcctcgattaac
tcttcacttccactgacacgagcttttatggataacaacatgtcaccagataattttgac
ttgatcgcgaacatgactgaatcggagagtgacgatggcaccgacgaaggcacttcaaca
caaacttttgtaccccactctcgcattcgcagccgtagcttgccaaaccttacgaataca
tgggcagatgagttaatgagcgctagcgacagcaggcccgatgtcgccgaaggcgtatac
ggatatagtatcgacaatcgcattgacagcactggaataccaaccggggaagctttatcc
cgtgatgaacagcagcaattcccagctgttgtcgaatcaatatcgataagtgagggagga
ggggcagattccctcggcgcacaagagtcttcttcgcaaagaggctcggacggccctctc
gtcatgggaagaggaacgaatgatcatcactcttcgcgaattaccgtaactccctcctcc
ggcgacgaagtccaacttcacgatcgtgaggtgagaagcaagactgacgtccgcagtgag
catgtgccacgacggatcaagtcaaatacgggagggacatcatgtagtggaaggcgaaat
ggtggccagagctttgtgacggatgggagggggcgtgtggtagcgacagacgatggggcg
catacggacgatgcttcgctggcgttctggtctccttccgtacctgtagctgcatcgcct
tctgcaccgacaagtgagacggatggtcgcctaacggaggaggcaggtgcccttgatgat
ctggactga
DBGET
integrated database retrieval system