Fomitiporia mediterranea: FOMMEDRAFT_166049
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Entry
FOMMEDRAFT_166049 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
fme
Fomitiporia mediterranea
Pathway
fme00260
Glycine, serine and threonine metabolism
fme00270
Cysteine and methionine metabolism
fme00450
Selenocompound metabolism
fme00670
One carbon pool by folate
fme01100
Metabolic pathways
fme01110
Biosynthesis of secondary metabolites
fme01230
Biosynthesis of amino acids
Module
fme_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FOMMEDRAFT_166049
00270 Cysteine and methionine metabolism
FOMMEDRAFT_166049
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
FOMMEDRAFT_166049
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
FOMMEDRAFT_166049
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fme04147
]
FOMMEDRAFT_166049
Enzymes [BR:
fme01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
FOMMEDRAFT_166049
Exosome [BR:
fme04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
FOMMEDRAFT_166049
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
18676423
NCBI-ProteinID:
XP_007263839
JGI:
Fomme1_166049
LinkDB
All DBs
Position
Unknown
AA seq
451 aa
AA seq
DB search
MTVGYSDGFGTRAVHTGSAPSLETGAVIPPISLATTYAQSAVGVHKGYEYTRSGNPNRDQ
LEQLLASIERGGEYALAFASGSSTTATVLQSLGPDAHVLSVNDVYGGTFRYMTKVSNLET
SFVDLEKEEDETIYAAIRSNTKLIWIESPTNPTLRLISIPRIVAIARSHPSRPLVLVDST
FLSPYYQSPLLAGADLVMHSLTKYINGHSDVLMGALILPERHTELAQHLRFLQNAIGAVP
SAFDCWLAQRGAKTLHLRMRQHGQSALRVARFLESRIGNEVKDVIYPGLASHPLNDVAYE
SLSPHARAWVDSLGDRETAGGFPYGGMVSFRIATPDAETYGGKAHATAENFLKSLRLFTL
AESLGGVESLAELPSLMTHGSIPPAERAQLGIGDDLVRLSVGVEDGDDLVRDVEQALQVA
VYGDPVKTKTNGVNGHVYLTASGDDSPPLVG
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcggctattcagacggctttgggacgcgcgcagtacacacaggttccgcacct
tcactagaaacaggcgctgtcattcctcctatttctcttgcaaccacatatgcgcagtct
gccgtcggtgtacacaagggctacgaatatacccggtcaggaaatccaaatcgcgaccag
ctcgagcagcttctagcaagcattgaacggggcggagaatatgctcttgcctttgcctcg
ggatcttctacgacggcaaccgttctccagagtctcggtccagacgcacatgttcttagc
gtcaacgatgtttatggaggaaccttccgctatatgaccaaagtttcgaacttagagacg
tctttcgttgatttggagaaggaagaagatgaaacgatctatgctgcgattaggtctaac
acgaaattaatttggatagaatcaccaacaaatcctaccttgcgactaatttccatccct
cgcatcgtcgcaatcgcgcgctcgcatccgtcaagaccgctcgttcttgtagactcgacc
ttcctctcgccatactatcagtcccctcttctggcaggagccgatctcgtcatgcattca
ctcaccaaatatatcaacggacactcagatgtccttatgggagcgctgatccttccagag
aggcacacagaactcgcccagcatcttcgcttcttgcaaaatgccatcggtgctgtcccg
agtgctttcgactgttggctcgctcaacgaggagctaagactttacatctccgcatgcgg
caacacggtcagagtgctttacgcgtcgctcgtttcttagaaagtcgtataggcaacgaa
gtaaaggacgttatttatcctggtctggcaagccatcctctaaatgacgtcgcgtacgag
agtttgagtcctcatgcacgcgcgtgggttgatagtctcggagatcgtgaaacggctggt
ggattcccttacggcgggatggtctcgttccgaattgcaactccagatgcagagacgtac
ggaggcaaggcacacgcaacagctgagaatttccttaaatcgctacgtctcttcacactc
gctgagtcgctcggtggtgttgagtctcttgcggagttaccatccctcatgacacacggc
tccatcccgcctgctgaacgcgctcaactcggaatcggtgatgacctcgtccgactaagc
gttggtgttgaggatggtgacgatctagtgcgcgatgtcgaacaggctttgcaggttgct
gtgtacggcgacccagtgaagacgaagacgaacggtgtaaacggacacgtttatttaact
gcgagtggagatgactccccgcctctcgttggttag
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