Fomitiporia mediterranea: FOMMEDRAFT_166367 Help Entry FOMMEDRAFT_166367 CDS       T03132                                  Name (RefSeq) hypothetical protein   KO K10643   CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] Organism fme  Fomitiporia mediterranea Pathway fme03018   RNA degradation Brite KEGG Orthology (KO) [BR:fme00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     FOMMEDRAFT_166367  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:fme03000]     FOMMEDRAFT_166367    03019 Messenger RNA biogenesis [BR:fme03019]     FOMMEDRAFT_166367    04121 Ubiquitin system [BR:fme04121]     FOMMEDRAFT_166367 Enzymes [BR:fme01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      FOMMEDRAFT_166367 Transcription factors [BR:fme03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     FOMMEDRAFT_166367 Messenger RNA biogenesis [BR:fme03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      FOMMEDRAFT_166367   mRNA degradation factors    3'-5' decay     Ccr4-NOT complex      FOMMEDRAFT_166367 Ubiquitin system [BR:fme04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     FOMMEDRAFT_166367 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  zf-RING_4 zf-TFIIIC Prok-RING_4 Na_H_antiporter zf-RING_2 RRM_1 zf-UDP Baculo_IE-1 zf-RING_UBOX Motif Other DBs NCBI-GeneID:  18676472 NCBI-ProteinID:  XP_007264230 JGI:  Fomme1_166367 LinkDB All DBs Position Unknown AA seq 1441 aa AA seqDB search MSMSKLHPSLPAPVVHSSHMTSSASKSHVLAGVQDAYWSDEEAEDEDCPLCLEEMDLSDL NFKPCPCGYQICRFCWHHIKENLNGRCPACRREYFDEAVQFKPVNKEDLKRLTQQKKQRE RERKDLDALGRRHLTNVRIVQRNVVYVVGLGSRYAKEELIPTLRSSDYFGQYGKITKILL VKRTPPGGRAPILGLYISYYRREDAARAIQVVDGAPSPSGGDEMMRASYGTTKYCIAFLR GVSCTNRGCMDLHEWGDEKDCFTKEDLTTLKHTMKDSENRQRSGVGIKRSEEGAGLPRSA GWGTKPALGPSSVGNAGGTSARGTRRGHRTTRSGAVGESRTQQSLSARQGAPPERRQPTK PSSQASSSRPSTPSIAGLPQLPASPASAIQTARQKQRKDSQNPLPPRSPASSVAVESDAG SGEAVSASPSLSAPRVATPPVSTTAAPPGLPAVPPGLSTPPPGIATPSTAQTSSPLIREA STSSYQISTQAQALLDDVMNRREALPSSTSFSPFPDLDRTLQNLTGGDGESGGFNFNLDP KLAVDDEQFDALPDLDSDQALSPGGHFDPFSDGRPVNNASPFHPPPGLSHGIMSSRPLYE SFKAPGVERTASSSSGYTGSFNPFGEAPETPSHTFAQRPSPAPDDDASRRMSRFGFARER QSSSGFLNSGTSSPLLSANTSLSSLSLAENANPPSGTSSHAPWPFQRQHEFPPPPGLGMP TRTGTPGSTRGSPLVPYAHAQALPHSTQPSYAPQTTRFQPFDMGSSEQSLKDMLGIGRGP AVRTTGASDNHNVLSSSRAPFHDPAIMSSVPYMSAAGNDGGFHFSPPDSSFSSGLSQSKP PGLSLQHGQQFTSQHNVSFPGQVPSSLAFANGLVTSPMIAQGQSHNQGPLVYHSSPPSFS ASLPENESTPEPNRAPSPMLSAADFPALPTAGASSDTHSQPRTAQSAQQTRDSSPVKDEA VQTKSDRKAAKKAEKAVERERIAKEKAAERERISKEKAEQRERAARERAEEKERQAKQKA EKERLAKEKAEREAEKERLEKERLLAMRKVEADKVAEKAAKNKAQAKAKQSLKGDTAEKA EGSRPATSRTQSSSAAVETASPMPILSKMPKKNKPTTKPIRIPKEDDVAHDTQSSVPSAV TANSESVQLPTPKLPNVSEVTRSSLETDVDSAGMTRESSESGPATKAKSVAELFEDIDVE KGQFYLDTHPFFDTSKINSATKISLDYNTMARALSAFPVTGAVFTDHLSPLNDKTVASFQ QLLETLTQTMSDLVQLLPQSTWGSIFDVLSQDLKNLKHEYALHSSTSFDGLVHDDLPEDA EDDEDLDTDSLEPLTPTVDKRAKWMEIQLAKLEELHREVNLAAVRTILASNDQGWDPHGS LPHVGNTLARFDQLGMVDEGGHKRPMTSEELEKKLVVAKEAAVFAEAELREAMQAMSVNK P NT seq 4326 nt NT seq  +upstreamnt  +downstreamnt atgtcgatgtcaaagctgcatccatcgctccctgctccggtggtccacagcagccatatg acatcctcggcctcaaaatcacacgtactggccggtgtacaggacgcgtattggagtgat gaggaggcggaagatgaagactgcccgctctgccttgaggagatggacttgtctgacctg aatttcaagccgtgtccgtgtggttaccagatttgccgtttctgctggcatcatatcaaa gagaatctcaatggccgctgtcctgcgtgtcgtcgtgaatattttgatgaggccgtccaa tttaagccggtcaacaaagaggaccttaagcgcctaacgcagcaaaagaaacagcgtgaa cgcgaaagaaaggaccttgatgcccttgggaggcgtcaccttacaaatgtgcgaatcgta cagcgcaacgtggtgtatgtcgtcggtctcggatcacgctatgcaaaggaggagctaatt ccgactttgcgctcaagtgattattttgggcagtatgggaaaatcactaaaatcttgctt gtgaagcgcactccgcccggtgggagggctcccatcctcgggttgtatatatcgtattac cggcgtgaagatgccgctcgcgctattcaggtagtcgatggtgctccctcacctagcggt ggagatgagatgatgcgagcgagttacgggactaccaaatactgcattgcattccttcga ggcgtctcatgtacgaatcgtggttgtatggaccttcatgaatggggtgatgaaaaggat tgtttcaccaaagaggatctgaccacattgaaacatacaatgaaggatagtgagaatcgt caaaggtctggagtcgggatcaagagatccgaagaaggtgctgggttaccgcgttccgct ggttggggcacgaaaccggctctcggaccttcgtcagtgggtaatgcaggtggtacttct gctcggggtactcgcagaggtcaccgcaccaccaggtccggtgcagtgggcgaatcacgg acgcaacaatctctttctgccagacagggagctccgccagaacgaagacaacctacgaag ccctcatcgcaggcgtcctcgtctcgaccttccacacctagcattgcgggtctacctcaa ctccctgcttctcccgcatctgccattcaaactgctaggcagaagcagcggaaggattct cagaatcccttacctccgcgctccccagcttcttccgttgctgtggaatcagatgcaggc tctggagaggccgtatctgcatcgccgtctttgtctgctccaagagtggctacccctcct gtttctacaacggcggctcctccaggtttaccagccgtacctcctggcctgagtactcct ccgcctggcattgcaacgccctcaactgcacagacctcttcccctcttattcgcgaggct tcgacttcatcttatcagatctcaactcaggcccaggcgttgcttgacgatgttatgaat cgtcgtgaagcactaccatcttcaacgtcctttagtcccttcccggatcttgatcgcacc ttacagaatctcactggcggagatggtgaatcgggtggttttaatttcaatttagatccg aagcttgccgtcgacgatgaacagtttgatgctcttccggacttagatagtgaccaagcg ttatcgcctggtgggcactttgatccgttctccgacgggcgtccagtcaataatgcgtcg ccattccacccaccccctggactttcgcatggtattatgtcgtctaggcctctttatgaa agtttcaaggcacctggagtagaaaggactgcgtcgtcttcgtcaggatacactggatca ttcaatcctttcggagaggcgccagagacgccgtctcatacctttgctcaacgaccttcc ccagcaccggacgatgacgcttctcgccgaatgtcacgatttggttttgctcgggaaagg caaagctcgagtggattcctaaattctgggacgtcctctccacttttgagtgcaaatacc tctttatcatctctttcgctggccgagaatgcaaatccgccctcaggaacgagctcacat gcaccatggccgttccagagacagcatgagttcccgcctccaccaggcttgggcatgcca acgcgtacaggaacaccaggttcaacgcgtggatctccacttgtcccttatgctcatgca caagcgcttcctcattcgacacaaccatcctatgcacctcagacaacacgctttcaaccc ttcgacatgggctcatctgagcagtctttgaaggacatgttgggtattggccgtggcccg gctgtgcgcacgactggagcttctgacaaccataatgtactaagctcttctcgagctccg ttccatgatcccgccattatgtcgtcagttccatatatgtccgctgcagggaacgatggc gggttccacttctctccgccagacagtagtttctcatcgggcctatcccaaagcaaacct cccgggctttctcttcagcatggtcagcaattcacgtcacagcataacgtgtcttttccg ggacaagtcccttcgtcgctagcattcgccaacggattggtgacctcgcccatgattgct caaggtcaatcccataatcaaggacctttggtctatcactcatcaccaccatctttttct gcatcattgcctgaaaatgaatctacaccggaaccaaaccgtgctccatctccgatgctc tcggctgctgacttcccggctttaccaaccgctggtgcaagctccgacacccattcgcaa ccgcgtactgctcaatcagcgcaacagacccgtgattcttctcctgtcaaggatgaagcc gttcagacaaagtcggatcgtaaggctgcgaagaaagcagaaaaggcggtcgaacgtgag cgcatagcgaaggagaaggcagctgagagagaacgtatctcaaaagaaaaggctgaacag cgagagcgagctgctagggagagagccgaagagaaggagcgacaagcgaagcaaaaggct gagaaagagcgtttagcaaaggagaaggcagaacgcgaagctgagaaagagcgattagaa aaggaacgtctgcttgcgatgcgaaaggttgaagcggataaggtggcagagaaggcggca aagaataaagctcaggcgaaggccaaacaaagtctaaagggtgatactgcggaaaaggcg gaaggttctcggccagccacgagcaggactcagtctagcagtgctgcagtcgagactgct tcacctatgcccatattgtcaaagatgccgaagaagaacaaaccgacgacgaagccgatc aggattccgaaagaggatgatgtagcccatgatacgcaatccagtgttccttccgccgtg accgctaactcagagtcggttcagcttcctacgccgaagctacccaatgtgtccgaagtc acgcgatcttctttagagacagatgttgacagtgctggtatgactcgggagtcttctgaa agtggtcctgcgacgaaggcaaagtccgttgcggaactctttgaagacatcgacgtagaa aagggacaattttacctcgacactcatcccttcttcgatacgagcaagattaattcggct accaagatctcactggattacaataccatggctcgagcgctttctgccttcccagtcacc ggagcggttttcacggaccacctgtcccctctcaatgataagaccgttgcatcattccag cagctattggaaacattgacccaaacaatgtcggacttggtacagcttcttcctcagtcg acttggggttcaatattcgatgtactcagtcaggatttgaagaacttgaagcatgagtat gcgttgcacagctcgacatcgttcgacggcctcgttcacgatgatttacctgaggacgcg gaggatgacgaagaccttgatactgattcgcttgaaccattgaccccaacagtagataag cgcgcgaagtggatggagattcaactggcgaaactggaggaactgcatcgcgaggttaac ttggcggctgtgcgtacaattcttgcatccaacgaccaaggctgggaccctcatggatcc ctgccgcatgtgggtaacactttagcgcggtttgaccagcttggtatggtggacgagggt ggtcataagcggccgatgacgagtgaagagctagagaagaagttggtagtagcgaaggag gctgcggtgtttgctgaggcagaattgcgagaggcgatgcaggcaatgtcggtgaacaag ccttga

DBGET integrated database retrieval system