Fomitiporia mediterranea: FOMMEDRAFT_166860
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Entry
FOMMEDRAFT_166860 CDS
T03132
Name
(RefSeq) TPR-like protein
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fme03021
]
FOMMEDRAFT_166860
Transcription machinery [BR:
fme03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
FOMMEDRAFT_166860
TFIIIC, fungi type
FOMMEDRAFT_166860
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_16
TPR_17
TPR_14
TPR_6
ARM_TT21
Alkyl_sulf_dimr
TPR_1
TPR_11
TPR_CcmH_CycH
TPR_9
BTAD
TPR_20
TPR_Slam
DUF3095
Trp_halogenase
SNAP
Motif
Other DBs
NCBI-GeneID:
18676555
NCBI-ProteinID:
XP_007265048
JGI:
Fomme1_166860
LinkDB
All DBs
Position
Unknown
AA seq
1042 aa
AA seq
DB search
MYTEDEQGIYYAAESGSSGSESLSDSSEESLESLENGGTNARDVDEGGGSIENQIEGDFD
RLIGFIQDTDDVASSATIRRIWDAPSGMDVEEDFQADLRAASGIGRVRKGKGRGKGRRLG
PALSHQVRALVGEGNAAYVDGNLQETIRIMTEVIRIEPRAASAWSVLATCYRELHETEKA
LQLSIIGAHLRHDPEEWHQLARQSQESGQAQQALYCLAKAIRLDPTNYDAIWDRASLAKE
LGNLPVARISYLAILKRFPHDTFVLSELRHILIELGELKLCAQLYQDALDHFTTIYPDGK
VPEPASIAIDPSLTASGGAFVGHSQASSDAFTLMEILVLADLYNTLEWYEKSIKAIRAGC
RWLQGRARQKYWDTCSDDREYDVEGFVREGSEDNLAIKQGFHPLDINARHRLAIARLKIG
DIEEGRMHTSIILDESIVDFAPLFAEIAETYYELAMYSEARPIYEMLGSDATTSSVHVLM
QAAECRRNLGDISDAIEVYEHLIATDPLNDQAKMKLAEIYEDSGHPRKALELVYQVIDSR
KKRSGPPKDDSVPREDTAGPATSLFVERKKGKAKLTSSVKPRSTLTREQVLEIELQNEQQ
AKTWYERVTQLWDAMRSGEESAECKWLENAEKLLEMFREARHLFVSRASRPYRRVVRSSK
EAHRLGREEDDEQKMASRLELEIEREKDDKEARKAQSRKAEATQFRGIHFDEWLTLAMEY
AFLLTRRQQIDAAEDVLRHLMMSTAFNGQKYQDTLRLTIATCALHARRFATVLQVFRRLM
LTYQFNNEIVRLFLAALASGLSPADQIVNTSFQKFVLREIRIHAAALEGNAHWTPTTQRF
MITTPASGKKDPDEVEDDDGGDEPERSVKDISDGGSSRPTKNNPVMPTLYGQSLIIAKSY
QSALFYLLHAYDYFPNDPLICMTLAVASLGRAMQRQSDNRNFLITQAMGFMAKYRTLRGP
AVDDPRADEIEYNFGRAFQQIGLLSHTVKHYERVLDIVEKRQFSDSDFIGVSREAAYNLC
LIYVTTGATSLAKAISQRWLSI
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgtatactgaagatgaacaaggtatctactatgctgctgaaagtggatcgtcgggctca
gagtccttgtcagatagttctgaggagagcctggaaagcttagaaaatggtggtaccaat
gcgcgcgatgtagatgaaggcggtggtagtattgagaaccagattgaaggtgacttcgat
cgtctcatagggtttatacaggatacagacgatgtggcaagctcggcaactataagaagg
atatgggatgcgccgagtggaatggacgtggaagaggatttccaagctgatttgcgtgct
gcgtctgggattggtcgagtcaggaagggcaaaggacgtggaaaaggtcgacggttaggt
cctgctctttctcatcaagtccgcgctctcgttggcgaaggaaatgccgcttatgttgat
gggaacttgcaagaaacaattcgtatcatgaccgaagttataaggattgaaccacgggct
gcttctgcttggagtgtcttggcaacatgctaccgcgaattacacgagactgaaaaagct
ctccaactttcgataattggtgcgcatctacgacacgatccagaagagtggcatcagctt
gcgcgtcagtcgcaggaatctggccaagcacagcaagcgctttattgtcttgcaaaagcc
atacgcctcgatccgactaactacgacgcaatctgggatagagcgtcccttgcgaaggaa
ctcggcaaccttcctgttgcgcgtatctcgtacctcgctattctgaagcgttttcctcat
gataccttcgttctatctgagctgcgacacatcctgattgaactaggtgaattgaagcta
tgtgctcaactctaccaagatgctttggatcacttcacaaccatttaccctgacggtaag
gtaccagaaccggcgtctattgccattgatccatcgctcactgcgagtggaggtgccttt
gttggccattcgcaagcctcctctgatgcgtttactttgatggaaatacttgttcttgcg
gacctgtacaacactttggagtggtacgagaaatctattaaagcaatccgtgcagggtgt
cgttggttacaagggcgtgcgaggcagaaatactgggatacatgctctgatgacagagaa
tatgacgtggaagggtttgtgcgagaaggtagtgaagacaacttagcaatcaagcaaggc
ttccatccccttgatatcaacgccaggcatcgtctggcaattgccagactgaaaataggt
gacattgaagagggacggatgcatacaagtattattttggatgagagtattgtggatttt
gcgcctctgttcgcggagattgcagagacatactatgaactcgctatgtattctgaagcg
cggccgatttatgagatgctggggtcagatgcgacgacgagcagcgtacatgttcttatg
caggcagcagagtgcaggcggaatttaggggatatcagcgatgctatagaagtatatgag
catctcatcgctacagacccattgaacgaccaagcgaaaatgaagcttgcagaaatatat
gaagatagtggacatccgagaaaagccctcgaacttgtttatcaagttatcgattcccgc
aagaaacgctctggacctcccaaagacgacagcgtcccacgtgaagacactgctggtcct
gcgacgtctctatttgtggagcggaagaaagggaaggctaagctgacaagctctgtgaag
ccgcgaagtactctgacgcgtgaacaagttcttgagatcgagctccagaacgagcaacag
gcaaagacgtggtatgagcgggtgacgcagttatgggacgctatgcgtagcggggaggag
agtgcggaatgcaaatggctggaaaacgctgagaaattgctcgaaatgtttagagaagca
cgacatcttttcgtctcgagagcttccagaccttatcgaagggtggtgcgctcatcaaaa
gaggcacaccgactcggacgagaggaagacgacgaacagaagatggcgtctcgccttgaa
ttagaaatagaacgcgagaaggatgacaaggaagcgaggaaggcacagtcacgaaaggcg
gaagcgacccagtttcgcggtattcattttgatgagtggcttactttagctatggagtac
gccttcctcttgacccggaggcaacagatcgacgcggcagaggatgttctccggcatttg
atgatgtcgacggcctttaatggacaaaagtatcaggacactcttcgcttgactattgca
acatgtgctctccatgctcggaggttcgctaccgtcctgcaagtattccgcaggctcatg
ttgacgtaccagttcaacaatgagattgtccggttgttcttggcggcccttgctagtggt
ctatctccggcggatcaaattgtcaatactagctttcagaagttcgtcctacgcgagata
cgtattcatgccgctgcattggaaggaaatgctcactggactcccacgacacaacgcttc
atgattacaactccagcctccggaaaaaaggaccctgacgaggttgaagatgacgatggc
ggagatgaacccgaacgttcagtgaaagatatcagcgacggaggttcgtcaagaccgacg
aagaataatcctgtgatgcctaccttgtatgggcaaagtctaattatagcgaagagttac
caatcggcactattttatctcctgcatgcgtacgactattttccgaatgatccgttaata
tgcatgactctggcggtggcttctcttgggagagctatgcagcgtcagtccgacaaccgg
aacttcctaatcactcaggcaatgggatttatggcgaaatacagaacgcttcgggggcca
gcagttgatgaccctcgcgcagacgagattgaatacaacttcggtcgggcttttcaacag
attggcttgctatcgcacactgtcaagcattatgaacgggtccttgacattgttgaaaaa
cgccagttctcggattcagacttcatcggtgtctcgagggaagcggcgtataacttatgc
ctaatttatgttacgacgggcgcgacatccctcgcaaaagcaattagtcaacgctggcta
tcaatctga
DBGET
integrated database retrieval system
