Fomitiporia mediterranea: FOMMEDRAFT_166920
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Entry
FOMMEDRAFT_166920 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K08518
syntaxin-binding protein 5
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fme04131
]
FOMMEDRAFT_166920
Membrane trafficking [BR:
fme04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
FOMMEDRAFT_166920
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
FOMMEDRAFT_166920
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lgl_C
WD40_Prp19
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
18676563
NCBI-ProteinID:
XP_007265140
JGI:
Fomme1_166920
LinkDB
All DBs
Position
Unknown
AA seq
1151 aa
AA seq
DB search
MALFSGTKTYLDFSYDLRDVRDWKITVLRETEYLHGITALAVDATNGLLAFGSKDGKILV
LGSPAATVVLRVSKPVKFLAFASLVFKLICIDTRGTLYMWDLAQLGRPGLVTSEAYMESI
SCLATSPYHSHAFIGLGRGAVMTYDMLCMNRSPYIIPNLWTSHEVSAHHAKFLSSHNAKP
SDLVDITIHPRDLNILFISYAGGCVLYDLTERRSLHHYELILPPGAPGPIGYYDPDVMKP
RRPALTSIAVHASGQLFVTGHADGSLAFWAVDDEEQPLMVRTIGRLDINYPEGEALDLAL
SNPHHLSAEDLDNLQLTPITKLSWSSFGPQAVSDPYTSSVLTVLGGIIPKQQTGVTTIRF
PAPALPTPSTQTQDRIHPDIRKYLTKTFSSMDRYTYSTFGHAIDFLLVPKESPHFGGNFD
PKAVLILFEWPEGQHGMTAKEFPPPVFVINQGPAIPAPTSSTHKEVEDQLDAELSSALKS
MEISNDPRDYTPSLPPACWTGMYAICGGDIVRLEKDEYELLQRNYLPSNSNVFAQMGRDK
TAGIAWVDYGETDQTTFTKRQPHRLIATHHADVTVRFQDISAQLLIGSVDSPLPATFPAP
LPHLTISFPRLLPETCIANARRPLSLGEAEIQSVQLTAESSECVTVMRSGHVFVFGLDGR
QRHLSDFQDMHDDLIRLFHIPAEANTFQPALMVENAWGSVRTAEMSDVGFLTIAYDSGAL
IVIDMRHPKIIFRDEGDKKQQKRLSVALHMHNAEEEKQIVSLKWFVCGYDEDPTPRVRLL
VSHRSGLARLFTLSQSGSSEWKVEQDVKRLEGVEHPLPQGSFILQAKTGASRVASRSTFR
EALQGGADPMLAKGDFTDEDAHCFWISAGEKGVKCQVNLTGGKVGRAEWGKGRQVECVQV
VSRKGTHALVVAMDNREVIIYSLPGLEAIHLFNLPRQPNSAICFDDTGDFVDWTFDEQTG
VITGTTLGTLFAMRRVYDEPVIDYNMGRRASPAMPPIVPLAPVSYLGSWFNFKKGKSGDA
IDDLLAGPKRPIPPDAETSTIVSKEWQTQMQNRAQAIANQASKTGSNIYANLSTAVSDRG
EMLNGLQEQFSGLEEGGRKFMLEAKKIAAEQTIVAEVRSWSGPGILHLDSGPDQICGPGV
SRTGDRTYVDG
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atggcactcttcagtggaacgaaaacctatcttgacttctcatatgacctgcgtgatgtt
cgagactggaagattaccgtcctcagagagacagaatacctacatggtataactgcgctc
gctgtggacgccacgaatggcttgctggcatttgggtcaaaggatggcaaaatccttgta
ctcggctctccagcagccacagtcgtcttacgcgtctcaaagccagtgaagttcttggca
ttcgcgtcactagtgttcaagctgatatgcattgatacccgaggaacgctctacatgtgg
gatctcgctcaacttgggcgtcctggactcgttacatcggaagcatatatggaatccatc
tcatgcttagcaacatctccataccacagccatgcgtttattggattgggacgtggagca
gtgatgacatacgacatgttatgcatgaatcgctctccatatatcataccaaatctgtgg
acatcccatgaagtatctgctcatcacgccaagtttttgtcttcacataatgcgaaaccg
tctgatctcgtagatatcaccatccatcccagggacctgaacattctcttcattagctac
gcaggtggctgtgtcctttacgatctaactgagcgtcgctcactgcaccactatgaactc
atacttcctccaggggcacctggaccaattggttattatgatcccgatgtgatgaaacct
cgtcgccctgcattaacttccattgctgttcatgcttctggacaactattcgtcacgggc
catgctgatggttcactggcattttgggccgttgatgatgaagagcaaccgctcatggtg
cgcacgattgggcgactagatataaactatcccgagggagaagcacttgatttggctctt
tcgaaccctcaccacctttctgcagaagatctggataatctccagttaacaccgatcact
aagctgagttggagctcattcgggccacaagccgtgagcgatccatataccagtagtgtc
ttgactgttctcggaggtatcatacccaagcaacagactggcgtcactactattcgattc
cccgcacctgctttgcccactccttcgactcagactcaagataggatacatccggacatt
cgaaagtatctaacaaagacattctcatcgatggacagatatacctactcgacttttggt
cacgctatcgatttccttctcgtaccgaaagaaagtcctcattttggtggtaattttgat
cccaaagctgttctaattttgtttgaatggccggagggccagcatggcatgacggctaag
gaatttcctcctccggtatttgttatcaaccaaggtcccgcaataccagcccctacttcg
tctacccataaggaagtggaggaccaattagacgcggagctctcttctgctttgaaatct
atggagataagtaacgatccaagggactacactccatcactcccgcctgcgtgttggacc
ggcatgtacgctatctgcggtggagatattgtgcgcctcgagaaggatgaatatgaacta
ttacaacgaaattatctgccgtccaattccaatgtcttcgctcagatgggtagggacaaa
actgcaggcattgcctgggtggattacggagaaacagatcaaacgacttttaccaaacga
cagccacacaggcttattgcaactcatcacgctgatgtgacggtccgtttccaagacata
agtgcacaactcctcataggctctgtcgactcgccccttcccgcgacatttcctgcacca
ttacctcatttaaccatctcgtttccgcggttgcttccggaaacatgtattgctaatgcg
cgtagaccactatcgttgggcgaggccgaaatacagtcagtgcaattgacggctgagtct
agcgaatgtgtcactgtgatgaggagcgggcatgttttcgtgtttggactcgatggaagg
cagaggcatttgtcggatttccaggacatgcacgatgacctcattcggctgtttcacatt
cctgcggaggcaaacacattccaacctgcactaatggtggaaaatgcatggggctctgtg
aggacggctgaaatgtctgacgttggtttcctcaccatcgcatacgatagcggtgcttta
attgtgatagacatgcgacacccaaaaataatattccgagacgaaggagataagaagcag
cagaaacgactttcggtggctcttcacatgcataatgctgaggaagaaaagcagattgtg
tcgttgaagtggtttgtttgtggatacgatgaagatccaactccaagggtacgcttgctt
gtatcccaccgctctggacttgctcgtctcttcacactttcacaatccggctcctccgaa
tggaaagtcgagcaagacgtcaaaagacttgaaggcgtagagcatccgctccctcagggt
tcatttattttacaggcgaagacaggtgcaagtcgtgttgcttcacgctcaacattcaga
gaggcgctccaaggaggtgccgatcctatgttggccaagggggacttcacagacgaggat
gcccactgtttttggatctctgctggtgagaagggtgtcaagtgccaggtaaatctgacc
ggtgggaaggtgggaagggcggagtggggaaagggaagacaggtcgagtgtgttcaagtt
gtatcccggaaaggcacgcatgcactcgttgttgctatggataaccgtgaggttatcatc
tattcacttccaggattggaagcaatacatttattcaacctgccaagacaaccaaactca
gcgatatgtttcgacgacactggagattttgtcgactggaccttcgatgagcagacggga
gtcatcactggcacgactctaggaacactattcgctatgcgaagagtttacgacgagcct
gtaatcgactacaacatgggaaggcgtgcttctccagccatgccacccatcgtaccgctt
gcacctgtaagctatctcggttcttggttcaactttaagaaaggcaagagcggggatgcg
atcgacgatttactcgctggtccgaagagacctattccgccggacgctgagacgtcaaca
attgtgagcaaagaatggcaaacacagatgcaaaatcgtgcgcaagcgattgcgaaccaa
gcgagcaagactggctcgaatatctatgccaacttatccacggctgtttcagaccgaggg
gagatgttgaatggcctgcaagagcaatttagtggtcttgaagagggtggaaggaagttt
atgttagaggcgaagaagattgcggcggaacagactatagttgctgaagtccggtcctgg
tccggtccgggcatacttcacctggactcaggaccggaccaaatctgcggtccgggagtg
tcccggactggggaccggacctatgtggacgggtag
DBGET
integrated database retrieval system
