KEGG   Fomitiporia mediterranea: FOMMEDRAFT_167976
Entry
FOMMEDRAFT_167976 CDS       T03132                                 
Name
(RefSeq) hypothetical protein
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
fme  Fomitiporia mediterranea
Pathway
fme03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:fme00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    FOMMEDRAFT_167976
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:fme01009]
    FOMMEDRAFT_167976
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fme03021]
    FOMMEDRAFT_167976
Protein phosphatases and associated proteins [BR:fme01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     FOMMEDRAFT_167976
Transcription machinery [BR:fme03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     FOMMEDRAFT_167976
    Little elongation complex (LEC)
     FOMMEDRAFT_167976
SSDB
Motif
Pfam: ELL
Other DBs
NCBI-GeneID: 18676750
NCBI-ProteinID: XP_007266543
JGI: Fomme1_167976
LinkDB
Position
Unknown
AA seq 887 aa
MPLPANSTISLQGHSRPGEGVTTMPKFAMLVRMTEATLDALQNLTASDKMDFELGDKPGI
LIRDQFFPMRYDREKDNQELFIRTTMAARPNAPLKLNANVVGKFTVEKVLNNKIAQRVRE
ATVTAKQQKNVSKAKRLEESSAMTNVAQKKDPSKKPAPQSTPTIVKSYASTAPNATTSTS
GPSSAALPKEMATTYRQRLVHYLALGAATRQDVLKEFGGQEVDHDIRTGIMDILIAVAQQ
EQKHKGASASQDTKWELKPQSWLEVRPYQFSGYTENVRTKVARHAKNWLFALKIPDTDPV
WEYMKFRAHGHGGASDAASSTPRATNGITSATAKAKAKGKEPKTKDPGMKSKSEVGARKA
PVQVPLPTKSNIAPDRAPTPLHSAKGKEREVDTEKEEGELSASQTPPRIPAVPVDRRQPG
SRPNGASTPSMKPPPIPASSQPSLPLKRTGPVDARGPKRAPPEPSERARAAPPIPPPVPA
ERNASTAVKKEVNQPKVRPSHPADEIPIPASRSSIQPEKERKIAKREREWEKESDRESLR
IPRREKERESDRESLRVPRREKERESDRESLRVVRKEKERESDRESIRMRDRSRAPSDRE
VVTKRRDREYEVVKEKKLKEREQVSRPVAKSSAKRKTPDSSDEESSDWGYEDRSNIRKSS
LKATKRDWEGAPAKTSASSSKPVKRESPPPKQRIKRETSPPPPAKTKVPADRRITVASSS
VAKPLKKEPRADELSRPTTSKSLKKRRASYDYTSSSEDEAPEPKILKSMTKTVASSHPAP
TKNGATASTSATPEVRPRKRKPAPKLSRRDQLRSRYNSKYTEYMAALQKLVAQKNKLKEA
LRNGSESASGDSDMDFDLPPLEEIQRVTEQHKRLHDELEEIRRSYMA
NT seq 2664 nt   +upstreamnt  +downstreamnt
atgccgctccctgcgaacagtacgatttcgctgcaaggccattcgcggccgggagaaggc
gtcactaccatgccaaagttcgcgatgcttgtccgcatgacggaggctactcttgatgca
ctccagaaccttaccgcgtcagacaagatggactttgagctcggcgacaagccgggtatc
ttgattcgcgatcaattctttcctatgagatatgacagggagaaggacaatcaagagctc
ttcatacgaactacgatggcggcgcgtcccaacgccccgctcaagctgaacgcaaatgtc
gttggcaagttcactgtcgaaaaggtactcaataataagatcgctcagcgcgtgcgtgag
gctactgtgactgcgaaacagcagaagaatgtgagcaaggctaaacgattggaggagtca
tccgcgatgacgaatgttgctcagaagaaagatccatcaaagaagcctgctcctcaatct
acaccgacaattgtcaagagttatgcttccaccgcgccgaatgcgactacgtctacgtcc
ggtccttcgtccgcggcgctcccgaaagagatggcgacgacctatcgccaaagactcgtt
cactaccttgctctcggagctgccacaaggcaagatgttcttaaagagttcggcggtcaa
gaagtggaccatgatattcgtaccggaattatggatatactcattgcagttgctcagcaa
gaacaaaagcataagggtgcatcggcgtcacaagacactaaatgggaactcaaacctcaa
tcgtggcttgaggtccgtccataccagttttctggctacacagaaaacgtgcgcacgaaa
gttgcacgtcatgcaaagaattggctttttgctctgaaaattccagacacagatcctgtc
tgggagtatatgaaattccgtgcccacggacacggtggtgcatctgatgctgcaagctct
acaccgcgtgccaccaatgggataacaagtgctacggcaaaagcaaaggcgaagggtaag
gaaccaaagacgaaagatccaggaatgaaaagcaagtcagaagttggtgcacgaaaggcg
cctgttcaggtgcccttgcctaccaagtccaatatagcgccggatcgcgctcccacgcct
ttgcatagcgctaagggcaaagaacgagaagtggataccgagaaggaggagggtgaattg
tctgcttctcagactcctcccagaatacctgccgttcctgtggataggcgccagcccgga
tcacgcccgaatggtgcttcgacgccctcaatgaagccaccccctattcctgcatcctcg
caaccgtcgctgccgttgaaacggacagggcctgtagacgcgcgtgggcccaaacgagca
ccacctgagccgagcgaacgagcgcgggccgcccctccgatccctcctcccgttcctgca
gaacgcaatgcatctacggcggtaaagaaagaagttaaccagccgaaggtacggccttct
catccggcggatgaaataccaatccccgcttcgcgaagctcaatccaacctgagaaagag
cgcaagatagcgaaacgggagagggaatgggagaaggagtcggacagggagagtcttagg
atacctcgtagggagaaagaacgcgagtcggacagggagagtctccgggtccctcgaaga
gagaaagaacgcgagtcagatagagagagtctacgggttgttcgaaaagagaaggagcgt
gaatcggatagggagagtattagaatgcgcgatagatcgcgagccccttcagatagggaa
gtagtaacaaaacgacgagacagggagtacgaagtggtgaaggagaagaagctgaaggag
agggagcaggtctcgcgaccggtagcgaaatctagcgcaaaacggaagacacctgattca
tctgatgaagagtcatctgactgggggtacgaagatagatcgaacatccgcaagtcgagt
ctaaaggcaaccaaacgtgattgggagggagcacctgctaaaacttcagcatcatcgtcg
aaacctgtcaagcgtgaatctcctccaccgaaacaacgtatcaagcgggagacctccccg
cctcctccggccaagacgaaggtaccagcagacagaaggatcacagttgcctcgtcttca
gtggctaagcctttgaagaaagagcccagggcagacgagttgtctcgcccgacaaccagt
aaatcgctgaaaaagcgtcgtgcctcctacgactacacatcttcctctgaggacgaagca
ccggagccaaagatcctgaagtcaatgacgaaaactgtagcttcatcgcacccagcacca
actaagaacggcgccactgcctctacctcagctacacctgaagtccggccacgcaaacgc
aaacctgctcctaagctgtcgagacgcgatcaactgcgttcgcgttataacagcaaatac
accgagtacatggctgctctccaaaaactcgtcgcacagaaaaacaaactcaaggaagct
ctgcgaaatggttctgagtcggctagtggtgattcggatatggatttcgatttacctcct
ttggaggagatccaacgggtgacggaacagcataagcggttgcatgacgagttggaagag
atacggaggagttacatggcttga

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