KEGG   Fomitiporia mediterranea: FOMMEDRAFT_168578
Entry
FOMMEDRAFT_168578 CDS       T03132                                 
Name
(RefSeq) zinc finger dihydrouridine synthase
  KO
K05544  tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
Organism
fme  Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:fme00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:fme03016]
    FOMMEDRAFT_168578
Enzymes [BR:fme01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]
     FOMMEDRAFT_168578
Transfer RNA biogenesis [BR:fme03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    FOMMEDRAFT_168578
SSDB
Motif
Pfam: Dus zf-CCCH_DUS3L zf-CCCH_4 Torus zf-CCCH_PARP12
Other DBs
NCBI-GeneID: 18676844
NCBI-ProteinID: XP_007267429
JGI: Fomme1_168578
LinkDB
Position
Unknown
AA seq 653 aa
MEVQRFRPGTAPIKAEYLISTEPRAAAIDDDAAESSTNHIRGTTGLVHQDDEGHVGLDGT
PPGKRQKLSREEKKKRTGANKARRFAKMKDELELCWKVAVGNECEFGKDCRFTHDIDEYL
AQKPKDLTFPTSVDSVSIQAYSAADCSNDIASVSELPPSVDPSVYCPVFDAKGECSHGFK
CRFLGSHIRKTESGTLEIVKDEEKVARRKLDTTELNYILLDSLKQLRSKKYPQPITEAYL
KELETSGNTKKEPARTTAQTTFSELELMADENESQKDTPDVPMRFNEKKRLNWRGLTYLA
PLTTVGNLAPISPAEKAMGLATSFLQGSKEEWSLVRRHPSERTFGVQLAGSKPGPLAAIA
EVMAREFGPRGIDFVDVNCGCPIDLVFRAGSGSALLDAPAKLSKILVGMSRALGEIPLTV
KLRTGVKEGKNTAHKFMPRLAAETGIGAMTLHGRTRQQRYTKLADWDYIKECVDAVHARE
VEEGLAPIPIFGGGDAYSSQDYWGSIDYSGVDGVMVGRGALIKPWIFTEIKERREWDISA
RERLELTRKYAEYGLNHFGSDTTGVNTTRRYLCEALSFTHRYIPIGLLEVLPGRLNDRPP
AFRGRDELETLLASTDSRDWVKISEMFLGKAPEGWTFTPKHKSNSYGAEESQG
NT seq 1962 nt   +upstreamnt  +downstreamnt
atggaagtccaaaggttcaggcccggaaccgctccgatcaaggcagaatatctaatctca
acagagcctcgggctgctgctatagacgatgatgcagcggagagctcaacaaatcatatt
agaggcaccactggtttagtgcaccaagatgatgaagggcatgtcgggctagatggcact
ccaccaggcaagcgccaaaaattatcgagggaggaaaagaagaagcgtactggagccaac
aaggctcgccggtttgcaaagatgaaggatgaattggagctctgttggaaggtggctgtt
ggaaatgagtgtgaatttggtaaagactgccggtttacgcatgacatagacgaatacctt
gcacagaagccaaaagacttgacgtttccgactagtgtcgattctgtatctatccaagcc
tactccgcagcggactgctcgaatgatattgcaagcgtatcggaactccccccatctgtg
gatccgtctgtatattgcccggttttcgatgccaagggagaatgcagtcatggatttaag
tgtcgtttcctgggttcacatatcaggaagacggaatcgggcaccctggaaattgtgaaa
gatgaagagaaagtcgctcgacgcaaattggacaccactgaactcaattacatcctactg
gatagcctcaagcagttacgatcgaaaaagtatccacaacccataacggaggcttacttg
aaggagttggaaacatctggcaatacgaaaaaggaaccagctagaactaccgcgcaaaca
acgttctcagaattagaacttatggccgacgaaaatgagtcacagaaagatacgccagat
gtcccgatgagatttaacgagaagaaaagactaaactggcgtggactcacttaccttgct
cccctcaccaccgttggaaacttagcgccgatatcacctgcggagaaagcgatgggtcta
gctacatcatttctccaaggttcaaaggaagaatggtcccttgttcgccggcatccctcg
gaacgaacgttcggtgtacaattggcaggtagtaagcctggaccactagctgcaatcgcc
gaagttatggcacgagaattcggtcctcgaggcattgatttcgttgacgtcaattgcgga
tgcccgattgacttggtgtttcgagctggaagtggttctgcacttctggatgcccccgcg
aagctgagcaagatactcgtcggtatgagcagggcactaggcgagattcccctcactgtc
aaactcaggactggagtgaaagaaggaaagaatactgctcataagttcatgcctcgtctc
gcggcagagacaggtataggggcaatgacactacacggccggacccgccaacagcggtat
accaaactcgcagactgggattatattaaggaatgtgtcgatgctgtacacgcaagagaa
gtagaagaagggttggctcctatcccgatattcggaggcggagacgcctattcttcgcaa
gactattggggaagcatagattacagtggtgtcgatggggtgatggtcggacgaggcgcg
ctcatcaagccgtggattttcacagaaataaaagaacggagagagtgggacatcagtgct
cgtgagcgccttgaactcactcggaagtatgcagagtatggtctgaatcatttcggaagc
gatacaacaggtgtgaacaccacacgtcgttacctctgtgaagcactctctttcacccat
cgctatatacccatcggactccttgaagtactcccaggacgcttgaatgaccgcccgcca
gcattcagaggacgagatgaattggagacattgctagcaagcacggatagtcgcgactgg
gtcaaaatctccgaaatgttccttggcaaagcaccagaaggttggacgttcacaccgaaa
cacaagagcaactcctatggagctgaagaaagtcagggatag

DBGET integrated database retrieval system