Fomitiporia mediterranea: FOMMEDRAFT_169058
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Entry
FOMMEDRAFT_169058 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K15165
mediator of RNA polymerase II transcription subunit 13, fungi type
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fme03021
]
FOMMEDRAFT_169058
Transcription machinery [BR:
fme03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
FOMMEDRAFT_169058
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
Med13_N
MID_MedPIWI
K_channel_TID
Motif
Other DBs
NCBI-GeneID:
18676933
NCBI-ProteinID:
XP_007268083
JGI:
Fomme1_169058
LinkDB
All DBs
Position
Unknown
AA seq
1766 aa
AA seq
DB search
MTNRAAPKRPGLTSPPVSTTSSTQPPSSVQQLTPDSKLSASCISLSPGFSVHFAVFSAQN
AAQSHLDVDLARRKVHESNSGRPIYNCLLTHPHLAKDEATLWVFTIDQGIPESDGIYASP
QLRDLELPGLARNTNGSLTYAELYPCSTTCSSQRIPCPNCLRISAGSEITAHAQTSPGSI
NPEPEETTPAISPTSSHGRTFDNPSVTCHLPRKPLRQALAFFLSAVQERVISDICEDAQL
SGKVARRLQTGILWGLPSLSSNWGGGWEQHAKTRPLTFTHIDVTLFPSGLFIRPQAQLTN
FLPFLPSLPLPPGTPINLLPFSTPAYYLNMYSGSTSALTRHFQANLVGLGAGDVLPSRGT
DQTTSSSENTTQFVIAWISVQNKQGEEKGMMVIWPAPLCISLMSMSTSDTPDEQDGKRLF
AYNRKPLAYIPELPLALQASPVPAPATVPPLPRPTSPHDPLVSPSLFTPVGRRSFSRETS
PSTPFPFRSANHLKSERPPITRATSSFSAETTQAFRTLTISQLPSSGLRNVAEGVGKFVD
FMAKERERERERIKKEKEASAAAAQAQKGSDLPLSLSTTIGGGATANLATNGLITLQNNA
IQEFAGLTPESMQVTPSIAVNVETSVSLSPQVQQQQTPAPPGQPAYPSPPEETVKSEQNY
SIQNNGTLGGYALEPPSTTAQQVQPAPSETFDSFEGIDKYMMDLDMDFTMALPSSAGNPR
EIIKADFDSMVFTDDDFSFFDDPVVTTSIPSTTIPDASAMTGDEALKALGVASLTQDTGQ
SAVPDSGQSLVVTGTPSPWTSRKPTEGVEGKDTMESVAPDLLPGSPDESTSSLGPDTPEI
INSSSVEILSSETHPFNPIRFSKRFCSSDAKYAVGKFSRSLIEQDSSSSSPRDASSVPVL
WKISYASLTDPRVEIVKKLIGMKRRMLTQGMRLGLPPRPFREEQRSEWESCCAAGEDDNA
SGAAMDVESDRDSDDDGDERNCYEDDDAVFVGDDDYSSVSRPSTPLASHLPLGPSLLATQ
FQHSLLLPLSVNLRPSGASSFSFATDLAEPMPNPVPTPVSPAAAANSSSERSKVVELVVR
AFAEEVVENAIWEEGWRVNAVGQAPIWKQENRNGRVEEVVEESYVIEDGWCGQRMSVGSF
SSLAASSLYSGTEGHNASFKPLDQPMFTVGKADTLIQIAPPAFRFWSKMGLTPRSGPKDV
VAFVFYEDGSSLASEVEGWLSRVSSAYTAKGYGTHSLRKSSLCAKDGLVPVRYATFRKAL
SSLIDSVGSTTSPLLLYIVTPTSILSMNSPILRQIFLSMHKVLSSSREEPVIRFQLVPEF
LLTAKDDVTTTSQVETFVDNVYERIPRPVKRYMSRSLLHPGERTRRYFEAPSFVLGRPST
TSTSLSFCHPPPDSGLLDRHTLLHVGYRLTKCRKWLVAACIDQRGEGHELGVWFVPSSVS
SDEGIRDGDRDRDWYKRLVAIVWGFAMEFARRANVEWRVAVAKLGSVGEGELAAWNALLN
EEMSEEKRTSSMQVSILSVDDESGWSVLTESNKNHPSTQRPGSSHDSSPTTTPTKMQSQN
QSHNQSQLSFASASSSYILPSLRLPLTSPFPSGIVEELGRQSFIPEDEESPKGSTNSAER
LLPLCSSVLVTVPSTPPHSTSPSPSSPHENGDKSGNGNGNRTTPRTTLIHLLHSTSFPSS
HSNTSSTCTPTSSSSPSSLSTKTIEETQQDIVKNYYELGVLTQARWRFSSLNGNGKGQRI
GLPYHLAALRVVDECLEVGEVGGEFS
NT seq
5301 nt
NT seq
+upstream
nt +downstream
nt
atgactaacagggcggcgcccaagcgacctggcctgacttcccctccggtctccacgact
tcttccactcaacccccctcatccgtgcaacagcttactccggactctaagctctcggct
tcctgcatctcgctttcacctgggttcagtgttcactttgctgtattctctgctcagaat
gctgctcagagccatttagacgttgaccttgctaggcgtaaggttcatgagagcaattcg
ggaaggccgatttacaattgccttctgactcatccacatctcgcaaaggatgaagctaca
ctttgggtattcaccatagatcaaggtataccggaatccgatggaatatacgcgtctcct
cagctccgtgacctcgaactacccggattagctaggaacacgaatggtagtttaacatat
gctgaactctatccatgcagtaccacctgctcatcgcaacgaataccttgtccgaactgc
ttacgaattagcgcgggctctgaaatcaccgcccacgctcaaacctcacccggttccata
aaccccgaacccgaagaaactaccccggccatatcaccaacttcgtcccatggaaggacg
tttgataacccctcagttacctgtcatcttcctcgaaaacctctccgccaagcgcttgct
ttcttcctaagtgccgtgcaagaacgagtaatcagtgacatttgtgaggatgctcaactt
tctggtaaggttgccagaagactccaaactggtattctttggggactcccaagcttgtcg
agtaattggggaggcggttgggaacagcatgcaaaaactcgcccgcttaccttcactcac
attgatgtcacactgtttccttcgggtctattcattcgacctcaagctcagctaaccaat
ttcctaccctttctaccgtcattgccgcttcctcctggtacaccgattaacttgctacca
ttttcaactccggcatattacctcaatatgtactctggttctacttccgctctgactagg
cacttccaagccaatcttgtcggtttgggtgcaggggatgtattaccatccagaggcact
gatcagacgacttcgagttctgagaacactactcagtttgttattgcgtggattagcgtc
cagaacaaacaaggggaggagaagggcatgatggttatttggccagcgcctctgtgcatt
tccctgatgtccatgtccacatcggatacaccagatgaacaggatggtaaacgattattc
gcttataaccgtaaaccactggcgtacataccggaattaccactcgctctccaagcgtcc
cccgttccagctcctgcgactgttccccctctacctcgccctacgtctcctcatgatccc
ctagtctcaccttccttatttacccctgtcggtcgacgatctttctctcgtgaaacttcg
ccgagtacaccgttcccattccgctccgcgaatcacctcaagtccgagcgaccaccgata
acgagagcgacgagctctttctccgcagagactacacaggccttccgaacgctcactatt
tcccaactcccttcgagtgggctgaggaacgtcgctgagggagttggcaagttcgttgac
ttcatggctaaggagcgggaacgtgaaagagaaaggataaagaaggagaaggaggcttct
gctgctgcggctcaggcgcaaaaaggatcggatttacctttatctttgtccacgactatt
ggaggaggtgcaacagcgaatttggcgacgaatggattgattacgttacaaaacaatgcg
attcaggaatttgcgggtttgacgcctgagtctatgcaagtgacgccgtcgattgctgtg
aacgtcgagacgagcgtaagtctttctccacaggtccagcagcaacagacgcctgcacct
cctggtcaaccggcgtatccttcgcctccagaagagactgtcaagtcagaacagaattat
tctattcagaataacggcaccctcggaggatacgcactagagcctccgtccactactgct
cagcaagttcaacctgccccatcagagacgttcgactcgttcgagggaatcgataaatat
atgatggacctcgatatggacttcaccatggcacttccttcctccgctgggaatccacgt
gaaattatcaaagctgatttcgattcgatggtgtttacggatgatgattttagtttcttt
gatgatcctgttgttacgacttctatcccttctacgactattccggatgcgagtgcgatg
acgggtgatgaggcgctgaaggctcttggggttgcatcgttgactcaggatactgggcaa
tctgccgtaccggattctggacagagcttggttgtgacgggtactccttcgccatggact
tcgagaaaacctactgagggtgttgaaggaaaggatactatggagtcggttgcaccagac
ctccttcctggttctccggatgaatcgacttcgtcccttggacccgatacaccagaaatc
atcaactcttccagtgtcgagatcttaagttcggaaacacaccccttcaatccgattcgt
ttctcaaaacggttttgctcgtcggatgcgaaatatgcagttgggaagttctcccgatca
ctaattgagcaagattcgtcttcgtcctccccgcgagatgcttcgtcggtgcctgtgctt
tggaagataagttatgcgtcgttgactgatccgcgagttgagatcgttaagaagctgatt
gggatgaaacggaggatgttgacgcagggtatgcggctgggtcttcctccccgaccgttc
cgagaagaacagcgaagtgaatgggagagctgttgtgctgctggtgaagatgacaacgcc
tctggtgctgctatggacgtcgagtcagatagagactccgacgacgacggcgacgagcgg
aattgttatgaagacgatgatgctgtttttgttggtgatgatgattactcttctgtttcg
agaccctcgacgccgcttgcgtcgcatttaccacttggacctagcctgttggcgacgcag
tttcagcattctcttctactcccgctttcggtgaatttaagaccgagtggggccagttcg
ttttcgttcgcgacggatttggctgaaccgatgccgaatcctgtgccgacgcctgtgtcc
cccgcggctgctgcgaattcaagcagtgagaggtcgaaggttgttgagcttgtggttaga
gcgtttgcggaggaggttgtggagaatgcgatttgggaggaggggtggcgggtgaatgcg
gttggacaggctcctatttggaagcaggagaataggaatggacgggtggaggaggtggtt
gaggagagttatgtgattgaggatggatggtgcgggcagaggatgagcgttggttcgttc
tcttctttagcagcttcttcgttgtattctggcactgagggtcataacgcctctttcaag
ccgcttgaccagccaatgttcacagtaggcaaggccgacactctaattcagattgcacct
ccggcgttccggttctggtcaaagatggggttgacaccgcgaagtggaccgaaagatgta
gttgcatttgtattttatgaggatgggagtagcctggcttcggaagtggagggttggctg
agtcgggtatcttctgcatatactgctaaaggctatggaacgcattctcttaggaagtct
agcttatgcgcaaaggatggacttgtccccgttcgatatgctacttttcggaaggctctc
agctcactgattgactcggttggatcaacgacatctccgctgctactttacatcgtcaca
cccacttccattttgtctatgaattctcctatcttgcggcaaatcttcttatctatgcat
aaagtcctctcctcaagtcgagaagaacctgtcatccgattccaactcgtcccggaattc
ctactcactgcgaaagacgatgttacgactacgtcgcaggtagaaacgttcgtggataac
gtatacgagcgtattcctcgacctgttaagaggtacatgtcacgctcactcctgcatcct
ggtgaacggacacggaggtacttcgaagcgccgtcgttcgtactcggtcgaccgtcaact
acttcaacatccttgtcattctgccatccaccgcctgattcggggttacttgaccgacat
acgctcttacacgttggttatcgacttacgaagtgtcggaaatggcttgttgcggcttgt
attgaccaacgaggggagggacatgagttgggtgtgtggtttgttccttcttcggtttct
tcggatgaagggattagagatggggatagggatagggattggtataagcggcttgtggcg
attgtgtgggggtttgcgatggagtttgcgaggagggcgaatgtggagtggagagttgct
gttgcgaagcttgggagtgtgggggagggtgaacttgcagcgtggaacgcactgttgaac
gaggagatgtcagaggagaaacgaacctcgtcgatgcaggtctctattctctccgtcgac
gatgagtcgggttggtcagtcctgacggagtcgaataaaaatcatcccagtacacaaaga
cccggttcaagtcacgattcctcgcctaccaccaccccaacgaaaatgcaaagtcaaaat
caaagtcacaaccagagtcaactgtcattcgcttcggcaagctcgtcgtacatcttacct
tcactccgattacctctaacttctccttttccctcgggtattgtggaggaacttgggagg
cagtcatttatccctgaagacgaggagtcgccgaagggtagtacgaatagtgcggaaaga
ttactcccgttatgttcctctgtccttgtcacagtcccttccacccctcctcactctaca
tctccttctccttcgtcacctcatgagaacggggacaagagtgggaatgggaatgggaat
aggaccaccccacgcacaacacttatccaccttcttcactccacttccttcccgtcctct
cactcgaatacctcctccacttgcactcccacttcctcatcttctccctcttctctgtca
acgaaaacgatcgaagagacgcagcaagacattgtaaagaattattacgagcttggcgtc
ctcacccaagcaaggtggcgattctcttctctcaatggtaatggtaaagggcagaggata
ggactaccgtatcaccttgctgcgttacgcgttgtggatgagtgtcttgaggtaggagag
gttggtggggagtttagctag
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integrated database retrieval system
