Fomitiporia mediterranea: FOMMEDRAFT_170881
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Entry
FOMMEDRAFT_170881 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
fme
Fomitiporia mediterranea
Pathway
fme00240
Pyrimidine metabolism
fme01100
Metabolic pathways
fme01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
FOMMEDRAFT_170881
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
fme02044
]
FOMMEDRAFT_170881
Enzymes [BR:
fme01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
FOMMEDRAFT_170881
Secretion system [BR:
fme02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
FOMMEDRAFT_170881
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
AAA_18
AAA_14
Motif
Other DBs
NCBI-GeneID:
18677226
NCBI-ProteinID:
XP_007271075
JGI:
Fomme1_170881
LinkDB
All DBs
Position
Unknown
AA seq
410 aa
AA seq
DB search
MFIIIIGTRASGKSTIKDYLIQRKKFKHVRLVYSGNAKETVSSPQDQNPTSIPPVSQDGA
SQAIVSSNKTGLKVDDPRSFISMTSSSASNIADEIRQSDPNLVPDIDGTLGFTDSARLLD
HVTRNWRDNFVTEDITTRAVLEPFLKRPFVLLVSVDAPTMTRYARYQKYRRSPPPPSKFS
FFSNRTLMSSSRHGPQAAAESLENFVSDDDRVSFGPDSDSVTTAYLFASQHLCHVNVINA
FPSLERLYNHLELIDLLNVDRLRPSWDSYFMKLAALASHRSNCMKRRVGAILVKDHSIIA
TGYNGTPYGVPNCNEGGCRRCNEGVPRSVDGFEECLCIHAEENALLEAGRERGKGCVIYC
NTCPCLKCTIKIVQNGIREVVYNLSYKMDASSARVFEIAGVKLRQYSPPA
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgttcatcatcatcattggtactagggcatctgggaagtctactattaaggactactta
attcagcggaagaagttcaagcatgttcgtctggtctatagtgggaatgcaaaagagact
gtttccagcccgcaggatcagaacccgacaagcataccgcctgtaagccaggacggtgca
tctcaagcaatagtttccagtaacaaaacaggtttgaaagttgatgatccccgttcattc
atctcaatgacatctagttcggcatcaaacatagccgatgaaattcgccagtctgaccca
aacttggtcccagatatcgatggcacgcttggttttacagactcagcacggctccttgat
cacgtcacgcgcaattggcgggataacttcgtcactgaagatatcacgacgcgagccgta
ctcgagccgttcctcaagcgaccgttcgtgttgcttgtcagcgttgatgcacctaccatg
acgcgctatgcgcgctaccagaagtatcgtcgttccccacctccaccaagcaaattctct
ttttttagtaaccgcactttgatgtcttctagccgacatggcccgcaggccgctgcggag
tccttggaaaattttgtctctgatgacgaccgtgtgtcattcggccccgattcagatagc
gtcacgactgcatacctctttgcgagccagcacctctgccatgttaatgtcatcaacgcg
ttcccttctctcgaacggctgtataaccatctcgaactaatcgaccttctcaatgtggac
cgccttcgaccaagctgggattcatatttcatgaaacttgcagcgctagcgtcacatcgt
tcaaactgcatgaagcgacgagttggggccattttagtaaaagatcattcaatcatcgca
acagggtacaacggaactccctacggtgtacccaactgtaacgaaggtggctgcaggcga
tgcaatgagggcgtacctagatcagtcgatggttttgaggagtgcttatgcatccacgcg
gaagaaaatgcccttcttgaggcgggccgagagagaggaaagggatgtgttatctattgt
aacacgtgcccatgtctaaagtgtactatcaagattgttcagaacggcatacgagaagtt
gtttataacctgagctacaaaatggatgcatcctccgctcgcgtgtttgagatagctggt
gtcaaacttagacaatattcaccgccagcatag
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