Fomitiporia mediterranea: FOMMEDRAFT_170902
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Entry
FOMMEDRAFT_170902 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
fme
Fomitiporia mediterranea
Pathway
fme02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FOMMEDRAFT_170902
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fme02000
]
FOMMEDRAFT_170902
Transporters [BR:
fme02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
FOMMEDRAFT_170902
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_CDR
ABC2_membrane_7
AAA_18
ABC_trans_N
AAA_33
AAA_22
AAA_21
AAA_28
ABC2_membrane_3
AAA_29
cobW
SMC_N
AAA_25
RsgA_GTPase
AAA_19
Motif
Other DBs
NCBI-GeneID:
18677229
NCBI-ProteinID:
XP_007271095
JGI:
Fomme1_170902
LinkDB
All DBs
Position
Unknown
AA seq
1469 aa
AA seq
DB search
MSVSAIPSQTPTLHDEPVHEEHIVSEVDISRAERAFHTLERATTTESRKELARRRTNSIS
DEKRALDVYDEEKAEQPFDLKEYLSSSNDKATAAGLKHKHVGVTWEDLQVDVNGGVDYKF
HVRTFGQAILEFCLLPYFWFMTLFNLVAPSKRNAMPTRTILHKSSGVLKPGEMCLVLGCP
GSGCTTFLKAIANQRREYGRVSGDVRYAGIDATEMAKRYKGEVVYNQEDDIHMATLTVQQ
TLAFALSTKTPGPNARLPGVSRKDFAREVLNTLLKMLNISHTANTLVGDEFVRGVSGGER
KRVSIAEMMATRAHVQCWDNSTRGLDASTALDFAKSLRIMTDVLGQTVFVTLYQAGEGIY
NLFDKVMVLDEGHQVFFGPPSEARAYFENLGYNKLPRQSTADYLTGCTDKNERQFAPGLS
AHSVPSTPEAMEAAFRRSRYGISLDDELSKYKLLQETEKADQEAFRAAVEADKKRGVSKK
SPYTLGFFGQVKALTKRQFQLRIQDRFQLITSYGLAWILAIVIGAAFYNLPPTSAGAFTR
GSVIFVAMLTSCLDAFGEMPTQMHGRPILHKQSAYGFYRPAAVALSNTLADLPFSASRIF
VFNVIVYFMPHLSWTAGGFFTFHLFTYLAYLAMQGFFRTMGLLCVNFDSAFRIATFFVPN
MISYAGYIIPIFDMKRWLFWISYINPLYYAFSGCMENEFMRISLSCDGNSVAPRNGGILN
KYPDGVGPNQVCTLFGSSPSSSSVPGSSYIGAGYQYNVSDLWRRNFVVLAAFFVVFQITQ
LIALEYFPRYTGVSSVTIFAKENAETKKLNEELHKRKENRALREKGEEDYSDEKKKDFSD
RRVFTWENLNYVVPVPGGNRRLLHDVMGYVKPGTLTALMGASGAGKTTCLDVLAQRKNIG
VVTGDILVDGRPLDSDFARGTAYAEQMDVHEGTTTIREAMRFSAYLRQPFSVSKEEKDAY
VEEMLELLELQDMADAMVFSLTVEARKRLTIGVELASKPELLLFLDEPTSGLDSQSAWNL
VRFLRKLADSGQAILCTIHQPSSLLFESFDRLLLLEKGGETVYFGDIGTDSHVLRDYFAR
YGAVCPPNMNPAEYMLEAIGAGVTPRIGSRDWKDIWLESPECARARQEIKEMKEKALAKP
YSSAVKKSTYATPFMYQLKTVVSRNNIALWRSPDYVFTRLFVHLFISLFSSLSLLQLTDS
LRDLQYRVFGIFWVSVLPAILMSQIEPLFIMNRRTFIREASSRIYSPYVFAIGQLISEIP
YSILCAIVYWALAVWPMGFGKGAAGTNGNGYQLLMIIFVELFGVALGQLIAAISPSIQIA
VLFNPFLGLVLTTFAGVTIPYPTMAKFWRSWLYWLTPYTYVLGGMLSTELHGLTVNCRDD
EFAHFNPPSGQTCQQWAGEFVSAFGGYLNNQNATADCQYCQYRKGDEFYTPLRISYDDRW
RDVWLVFCYFVFNMVATIIASRFLRFAKR
NT seq
4410 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcagtgccatcccgtcccagactccgaccctccatgacgagcccgttcacgaa
gagcacatcgtgtccgaggtcgacatctcacgcgccgaacgcgcattccacaccctcgaa
cgcgccaccaccaccgagtcccgcaaggagctcgcaaggcgacgtaccaactctatctcg
gatgagaagagagcactcgatgtgtacgatgaggagaaggcagagcagccgttcgacctc
aaggagtacctcagctcgtctaacgacaaggctactgccgccggtctcaagcacaaacat
gtcggtgtcacctgggaagacctccaggtcgatgtcaatggtggtgtcgactacaagttc
cacgttaggacattcggacaggcaattttggaattttgtttgcttccgtatttctggttc
atgactttgtttaatcttgtcgccccttcaaaaagaaatgcgatgcctacacgcacgatt
cttcacaaatcatcaggggtgttaaaacctggcgagatgtgccttgttcttggctgccct
ggatcaggctgtacaactttccttaaggcgatcgcaaaccagcggcgcgagtatggccga
gtatcgggcgacgtgcgctacgcaggtatcgatgccaccgaaatggctaaacgttacaag
ggcgaagtggtgtacaaccaggaggacgatattcatatggctactctcactgtgcagcag
actttggccttcgcacttagcacaaaaactccaggtccgaatgcacgacttcccggcgtc
tcgcgcaaggactttgccagggaagtcttaaatacgcttttgaaaatgctcaatatcagc
cacactgcaaacacactcgtcggcgatgaattcgtacgcggtgttagcggcggtgagcgc
aagcgtgtaagtatcgcggaaatgatggcaactcgtgcccacgtccagtgctgggataac
tcgactcgcggactcgatgccagtactgccctggacttcgctaagagtctaagaatcatg
accgatgtacttggacaaacggttttcgtcacactataccaggctggtgaaggaatctac
aacctatttgacaaggtcatggtacttgacgagggtcaccaggtcttcttcggaccgcct
tcggaggctcgtgcgtacttcgagaaccttggatacaataaactcccgcgccagagtaca
gcagactatcttaccggttgcacggacaagaatgagcgccagtttgctcctgggctttct
gcacacagcgttccttcaacacctgaggcaatggaagctgccttccgcagatctcgttac
ggaatttccctcgatgacgagctctccaagtacaagctcctacaggaaaccgaaaaagct
gaccaagaagcctttcgcgcagctgtcgaagctgacaagaaacgtggtgtatctaagaag
agtccttatacgcttggattctttggacaggtcaaggcccttactaagcgtcagttccag
ctgcgcattcaagatcgcttccagcttatcacttcatacggacttgcatggattcttgct
atcgtcattggagcggcattctacaacctcccgccaactagtgcaggagcatttacacgt
ggttcagttattttcgtcgcgatgcttacaagttgcctcgatgcatttggtgagatgccg
acacagatgcatggaaggccgattctgcacaagcaaagtgcttacggtttctatcgcccc
gcggccgttgcactcagcaacactctagcagatttaccgttcagtgcatcgcgtatattc
gtgttcaacgttatcgtgtatttcatgccgcacctcagctggactgctggtggtttcttt
acgttccatctgttcacttaccttgcgtacctcgccatgcaaggcttcttccgcactatg
ggacttctatgtgtcaactttgacagcgcgttccgcattgcaactttcttcgtgccgaac
atgattagttatgcgggctacattatccccattttcgatatgaagcggtggctcttctgg
atttcgtacatcaatccgctctactatgccttctccggatgcatggagaacgagttcatg
cgtatttcgctatcatgcgacggtaattccgttgccccaaggaatggtggtattttgaac
aagtaccccgacggcgtcggaccgaaccaagtgtgcaccctctttggttcatcacccagt
agttcgtcagtacctggcagctcgtatatcggtgccggttatcagtacaatgtgtccgat
ttatggcgccggaatttcgtggttctagctgcattcttcgtcgtattccaaatcactcag
ttgatcgcacttgagtacttcccgcgttatactggcgtatcgtctgtaacgatctttgct
aaggagaatgcagagacgaagaagctgaacgaagagctacacaagcgtaaggaaaaccgt
gctttgcgcgagaagggagaagaggactacagtgacgagaagaagaaggatttctcagac
cgccgcgtcttcacttgggagaacctgaactacgttgtacctgtacctggtggcaatcgt
cgtttgctgcacgatgtcatgggatatgtgaaaccaggtacacttactgcgttaatgggt
gcgtccggtgctggtaagacgacgtgtttggacgtccttgcacaaaggaagaatattggt
gttgtcactggagacattcttgtcgatggtcgccctctcgattccgacttcgcacgcggt
actgcatatgccgagcaaatggatgtacacgagggaacaacgacgattcgcgaggccatg
cgcttctccgcttatctccgccagcctttctcagtgtcgaaggaagagaaagatgcatac
gtcgaggaaatgcttgagctactcgagttgcaagacatggcggatgcgatggtcttcagt
ctgactgtcgaggcacggaaacggttgacaatcggtgtcgaactcgcgagcaagcctgag
ttgcttttgttcttggacgagccgacctcgggtctcgacagtcagtctgcatggaatctg
gttagattccttaggaagcttgcagacagtggacaagctatactgtgtaccatccaccaa
ccgtcttcgcttcttttcgaaagtttcgatcgcttgcttcttcttgagaaagggggtgag
acagtttacttcggcgacatcggcacagattcgcatgtactacgcgattactttgcgcgc
tacggagctgtctgcccgccaaatatgaatcccgcggaatacatgcttgaggcgatcggc
gcaggtgttacaccgcgtatcggcagtcgcgactggaaggatatctggcttgagtctcca
gaatgtgctcgtgcgcgtcaggaaatcaaagagatgaaagagaaagcgctcgcgaagccg
tactctagtgctgtgaagaagtcaacttatgcaacgccgttcatgtaccagctcaagacg
gtcgtttcgaggaacaacatcgcactttggcgttcaccagactatgtgttcacgcgactc
tttgttcacctgttcatctcgctcttctcttcgctgtcgctccttcagcttactgacagt
cttcgtgacctccaataccgagtgtttggaattttctgggtgtccgtcttgccagctatt
ctgatgtctcagatcgaacctctattcatcatgaaccggaggactttcatcagagaggct
tcgagtcgcatctactcgccgtatgtcttcgccatcggccagttgattagtgaaattccg
tactcgattctctgcgctattgtctactgggctcttgcagtatggccaatgggcttcggc
aagggagcggccggtacgaatggaaacggctaccagctgctcatgatcattttcgtggaa
ctcttcggtgtcgccctcggtcagttgatcgccgctatctcaccttctatccagattgcc
gtcttgttcaacccgttcttgggtctggtactgacgaccttcgctggtgtgactatcccg
tacccgacgatggcgaagttctggcgctcgtggctgtactggcttacaccatacacgtac
gtgttgggaggtatgctttctaccgaacttcatggtctgaccgtcaattgccgggacgac
gagttcgcgcatttcaaccccccatctggccagacatgccaacagtgggcgggagagttc
gtctctgcgtttggtggatacctgaacaaccagaacgcaacggctgattgccagtactgt
caatacagaaaaggtgacgagttctacacaccacttcgtattagctacgatgaccgctgg
cgggatgtttggctcgtattctgctacttcgttttcaacatggttgctactattattgca
tcacgtttcctccgtttcgccaaacgatag
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integrated database retrieval system