Fomitiporia mediterranea: FOMMEDRAFT_17908
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Entry
FOMMEDRAFT_17908 CDS
T03132
Name
(RefSeq) ubiquitin-domain-containing protein
KO
K04523
ubiquilin
Organism
fme
Fomitiporia mediterranea
Pathway
fme04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
FOMMEDRAFT_17908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fme04131
]
FOMMEDRAFT_17908
03051 Proteasome [BR:
fme03051
]
FOMMEDRAFT_17908
Membrane trafficking [BR:
fme04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
FOMMEDRAFT_17908
Proteasome [BR:
fme03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
FOMMEDRAFT_17908
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
UBA
Rad60-SLD
UBA_7
Dsc3_N
UBQLN1
OTU1_UBXL
Ubiquitin_2
Rad60-SLD_2
Ddi2_HDD
TBK1_ULD
GerD
UBA_HOIP
Ubiquitin_4
Ubiquitin_5
Rap1_C_Sp
Motif
Other DBs
NCBI-GeneID:
18677474
NCBI-ProteinID:
XP_007263796
JGI:
Fomme1_17908
LinkDB
All DBs
Position
Unknown
AA seq
418 aa
AA seq
DB search
MADAESSSSSSVDEKVDINIKGPDAKVTIKISLNETVLDLKNAIQTETGVEANRQRLIYS
GRVLKDADVLSTYKIRPLDTIHMVKGAARSAESGPSSAGGASASTPQQLPTMQTGQNPSD
PLTLLNGPMGHGLLNANFNPFADMGLNPGDPNMMQGLMDNPAFLQQMSSMMSNPAVLDQI
ISMNPQLAAMGPQARQIMQSDAFRQMISNPQAFQSMMRLSSMMHGGGASPFGGAAAGGAN
SFPAPGLPSSAQQTQAQTQTPQSPQSQPQSPNTQQNPYAALATLLGSMPPPPAQQGAGTG
AATGTTPGSPPAAGTGATGAVPGTGAAPGSNPFGAIDPSLVQNLLGGMGGFGGFGGGIGA
GTPQPADTRSPEERFQVQLQQLQDMGFSNAQQNVRALLATGGNVHAAIEYILGGGGLM
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgctgaatcatcatcctcttcctctgtagacgagaaagtcgacattaacatt
aagggcccagatgcgaaagtgacgatcaaaatctcgttaaacgagacggtcctggacctc
aagaatgccattcagaccgaaacaggcgtcgaggctaatagacaaagattgatttatagt
ggtcgagtacttaaggatgcagacgtgctctcgacatacaagatacggcccttagacacg
attcacatggtgaaaggcgctgcacgaagcgccgagtcgggaccctcctcagcaggcggc
gcatcggcatctactccacaacaactaccaacgatgcaaaccggacaaaacccaagcgat
ccacttacacttttgaacggaccgatggggcacgggttgctcaacgcgaacttcaacccg
tttgcagacatgggactgaatccgggtgacccaaacatgatgcaaggtctgatggacaac
cctgcgttcttgcaacaaatgagctcgatgatgtcgaaccctgctgttcttgatcagatc
atcagcatgaaccctcagcttgccgctatgggtccacaagcacgacaaattatgcagagc
gatgctttccgacaaatgatctcaaacccacaagcttttcaatcgatgatgcgcctttcg
tcaatgatgcacggcggtggagcgagcccattcggcggggcagccgctggaggagcaaac
tcattccccgccccaggcctcccatcgtcagctcagcaaacacaagcgcagactcaaaca
cctcagtcgcctcagtctcagcctcagtctccaaatacacagcaaaacccttatgccgct
cttgctaccttactcggttccatgcctccaccgcctgcccaacaaggcgctgggacaggt
gcggcgactgggacaacacccggttctcctccggccgcaggtacaggcgctacaggtgca
gttcccggtaccggtgcggctcccggatccaacccatttggcgccatcgacccatccctc
gtccagaacctcctaggaggcatgggcggtttcggagggtttggcggaggcataggcgcc
ggtacaccccaacccgccgacacccgcagccccgaagagcgtttccaagtccaactccag
cagctccaggatatgggatttagtaatgcacagcagaacgtgcgtgcgttgcttgcgacg
ggtgggaacgtgcatgctgcgattgagtatatacttggtgggggtggacttatgtag
DBGET
integrated database retrieval system
