Fomitiporia mediterranea: FOMMEDRAFT_18549
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Entry
FOMMEDRAFT_18549 CDS
T03132
Name
(RefSeq) long-chain-fatty-acid-CoA-ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
fme
Fomitiporia mediterranea
Pathway
fme00061
Fatty acid biosynthesis
fme00071
Fatty acid degradation
fme01100
Metabolic pathways
fme01212
Fatty acid metabolism
fme04146
Peroxisome
Module
fme_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
FOMMEDRAFT_18549
00071 Fatty acid degradation
FOMMEDRAFT_18549
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
FOMMEDRAFT_18549
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
fme01004
]
FOMMEDRAFT_18549
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fme04147
]
FOMMEDRAFT_18549
Enzymes [BR:
fme01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
FOMMEDRAFT_18549
Lipid biosynthesis proteins [BR:
fme01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
FOMMEDRAFT_18549
Exosome [BR:
fme04147
]
Exosomal proteins
Exosomal proteins of breast milk
FOMMEDRAFT_18549
Exosomal proteins of breast cancer cells
FOMMEDRAFT_18549
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-GeneID:
18677572
NCBI-ProteinID:
XP_007264605
JGI:
Fomme1_18549
LinkDB
All DBs
Position
Unknown
AA seq
691 aa
AA seq
DB search
MSKPFPKWPVVDGVKVASVVVEEGSKEGETPTRRNALHAKALVTQPLEGVTTVPDILAYT
ARTHGTKNAVGWREIIDIHEEEKEVKKTVGGKEVTEVKKWKYFELSDYKYLNYIEVKDAA
TEVAAGLNELGVKKGDVFNVYAQTSLPWQFISHGCMYIAATVATAYDTLGEAGLQHSLNE
PECVGIFTNAELLPTVARVLENVPSVKVIIYDGEPSAKLLDELRSKREGLRLYSFDELRQ
LGKGKTLDGAATAAPDDVACIMYTSGTTGAPKGVVITHSNLIASVGAVFELLGHHLSLDD
TFLAYLPLAHILEYIVELALYFVGMTIGYGRVKTLTDASVRKCPGDLRAFKPTIMVGVPA
VWETIRKGILSKVNTSGTLKKNVFQGAIAVKKANIPALKQIVDAAVLSAVRQQTGGRLRL
AMSGGAALSKETQEFLTLALVTMLQGYGMTESCGMCAILPPEFMQYGSVGAPVPSVEIKL
LDVPEAGYFSTNKQPQGEVLLRGPSVIKGYYKRDDLNNDETIFTKDGWLRTGDVGTWNKD
GTLSLIDRIKNLIKLQGGEYIALERLESIYKSCNLVSNICVHATPDASRPIAIIIPHEVH
LRQAFPNQDQSSSKSLHDLCEDESVQKMVLKACNDAGKKNGFKPMELLQNVVLTPEEWTP
ESGLVTAAQKVQRKKVAERFEREIKEAYAKS
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaccctttccaaagtggccggtcgttgacggcgtaaaggtcgcctctgtcgtt
gttgaggaaggctccaaggaaggcgagactccaacccggcgtaatgcgctccatgcaaaa
gcgctcgtaacgcagccgcttgagggtgtcactaccgtccctgacatcctcgcttacact
gcgcgcactcacggcacgaagaacgcggttggttggcgtgagatcattgacattcatgaa
gaggagaaagaggtcaagaagacggtgggtggaaaggaggtcaccgaggtcaagaagtgg
aagtatttcgagctcagcgattataagtacctcaattatattgaggtcaaagatgctgcc
acggaggttgctgctggattgaatgagcttggcgttaagaagggtgacgtgttcaacgtc
tatgctcagacaagtctgccctggcagttcatttcacatggatgcatgtacattgctgct
actgtcgccacagcatacgacaccctcggtgaagcaggcttacagcattcgctaaacgag
ccagagtgcgttggtatcttcaccaatgccgaactcctccctacagttgctcgtgtgctg
gagaacgttccttctgtcaaggtgattatctacgatggcgagccatcagcgaaactgctc
gacgagcttaggtccaagcgtgagggacttcgcttgtatagctttgacgagcttcgccag
cttggcaagggcaagaccttggacggtgccgccactgccgcgccggatgatgtcgcgtgc
attatgtacacgagtggtacgacgggtgcgccgaagggtgttgtcattacccacagcaat
ctcattgcgtcggtcggcgccgtattcgaattgcttggccaccatcttagtctagacgac
acgttcctggcttacctcccgcttgcgcacatcctggaatatatcgtcgagcttgcgttg
tacttcgtgggaatgaccatcggatacggacgcgtgaagacgctcacagacgcgtcagtg
cgcaaatgcccaggtgatctccgagctttcaagccaacaatcatggttggcgttcctgca
gtgtgggagacgatccgaaagggtatacttagcaaggttaacacctccggtacgctcaag
aagaatgtcttccagggagcgattgcggtgaagaaagcgaacatacctgcgttgaagcag
attgtggacgcggctgtgttgagtgctgttaggcagcagacgggaggacggttgagactt
gcgatgagtggaggtgctgcgttgagtaaggagacgcaggagtttttgacacttgcactt
gttaccatgttgcaaggctacggtatgaccgagtcctgcggcatgtgcgccatcctccca
ccagagttcatgcaatacggttctgtcggtgctcccgtaccatcagtcgagattaagtta
ctcgacgtaccagaagcaggctacttctcgacgaacaaacaaccacagggtgaagtatta
ttgaggggtccgtcggttattaagggatattataagcgcgatgaccttaataatgacgag
acgatatttacgaaggatgggtggttgaggactggggacgttgggacttggaataaggat
gggacgcttagtttgattgataggataaagaacttgattaagcttcaaggtggcgagtat
atcgccctcgaacgtctcgaatcgatctacaaatcctgcaacctcgtctccaacatctgc
gtacacgccacacccgacgcttcacgtcccatcgcaatcatcataccccacgaggtacac
ttacgccaagcctttcccaaccaagatcaatcatccagtaaatccttacacgatttatgt
gaagacgaaagtgtacagaagatggtactcaaagcgtgtaacgatgctgggaagaagaat
gggtttaagcctatggagttgttacagaatgttgtgttgacgccggaggagtggactccg
gagagtgggcttgtgactgctgcgcagaaggtacagaggaagaaggttgcggagaggttt
gagagggagattaaggaggcgtatgcgaagtcgtaa
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