Fomitiporia mediterranea: FOMMEDRAFT_187148
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Entry
FOMMEDRAFT_187148 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
fme
Fomitiporia mediterranea
Pathway
fme00040
Pentose and glucuronate interconversions
fme01100
Metabolic pathways
Module
fme_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
FOMMEDRAFT_187148
Enzymes [BR:
fme01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
FOMMEDRAFT_187148
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Beta_helix
Motif
Other DBs
NCBI-GeneID:
18677601
NCBI-ProteinID:
XP_007267172
JGI:
Fomme1_187148
LinkDB
All DBs
Position
Unknown
AA seq
410 aa
AA seq
DB search
MIFHLLLLIFSLHGLILARFLPERATKACTLSPDTSGGDDSPAIMAAFDRCSQDSTIVFE
NGTYHIERIMITTGLKNVKVDMRGYLLWSTDLDYWRENGIPLGYLNMTTAWRFGGSDILW
EGHNIGTFDGNGQLWYDLTKGVSNLPGRPISLVITNTSDSVFDGIRFVQSQFWTMAITYS
MGLLLQNIYINSTSMNHDPARNTDGVDTFYSDDLVFRNWTVNNDDDFIAPKANSSNILIQ
DSRFYHGVGVAIGSIGQYPGVYEFIENVFAERITCIECQYAAYVKTWTGVQQGYPPNGGG
GGIGYARNITFRDFQVQNLTRAAAYITQCTSFDGATDGCDTSLFQLSDMAWENIRGTIDT
NVLAELQCSGSAPCPGISLLGFDMLQANGSEREIQCSNIVNPVGFQCTNG
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgatttttcacttactgttactcatattttctctccatggcttgatccttgctcgattc
ttgcctgagcgtgcgacaaaagcgtgcacgctcagcccggacacatctggtggtgatgac
tctccggcaattatggcggctttcgatcgatgctctcaggacagtaccattgtattcgag
aacggcacgtaccacatcgaaagaattatgatcacaactgggttgaaaaatgtcaaggtc
gacatgcgtggttatcttctctggagtactgatctcgattattggcgagaaaatggtatt
ccgcttgggtacctaaatatgacgacggcatggaggtttggtgggtccgatatactatgg
gaaggacacaacattgggacatttgacggaaacgggcaactttggtatgatctgacaaaa
ggagtttcgaatcttccaggacggcctatcagccttgttattacaaatacttctgactct
gtttttgatggaatacgatttgttcagtctcaattttggacaatggcaatcacgtattcc
atgggccttctactccagaatatttatatcaacagtacatcgatgaatcacgatcctgcc
cgaaacactgacggcgttgacactttctactctgatgatttggtattccgtaattggact
gtcaacaacgacgatgacttcatagccccgaaggccaattcatcgaatattttgattcaa
gactcacgtttctaccatggagttggtgttgcgattgggtcaatcgggcaatatcctgga
gtgtatgaatttattgagaacgtatttgcagaacgcatcacttgtatcgagtgtcaatat
gctgcttacgttaagacatggactggtgtccagcagggttatcctcctaacggcggaggc
ggaggtattggttatgctaggaatataacgttcagagattttcaagtacagaacttaaca
cgtgcagcagcatacattacacaatgcacatctttcgatggagccacagacggatgtgac
acgtcgctcttccagttatcagacatggcctgggagaatattcgagggactatagacacg
aatgtccttgcagagttgcagtgcagtggatctgctccgtgtcccggaattagtttgctt
ggattcgacatgcttcaggcgaatggatcggagagagagatccagtgtagcaatatcgtt
aatccagtagggtttcagtgtacgaacggataa
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