KEGG   Fomitiporia mediterranea: FOMMEDRAFT_19080
Entry
FOMMEDRAFT_19080  CDS       T03132                                 
Name
(RefSeq) hypothetical protein
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
fme  Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:fme00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:fme04121]
    FOMMEDRAFT_19080
   03400 DNA repair and recombination proteins [BR:fme03400]
    FOMMEDRAFT_19080
Enzymes [BR:fme01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     FOMMEDRAFT_19080
Ubiquitin system [BR:fme04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    FOMMEDRAFT_19080
DNA repair and recombination proteins [BR:fme03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    FOMMEDRAFT_19080
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C zf-RING_5 zf-C3HC4 Prok-RING_4
Other DBs
NCBI-GeneID: 18677676
NCBI-ProteinID: XP_007265292
JGI: Fomme1_19080
LinkDB
Position
Unknown
AA seq 1340 aa
MATHSETHPSASSSSFFAPYSRSNPIDLTLDDDPQARPRHTKRQRMDFDLDSNPSSTASS
PSIRSPSPSVSSKPVLSRYPAALHVQSTRPDYLSHIVQPQGAYRPHFSGPSDSSAFFPNR
NIQTSNVRTPSLSGLNLSNGAQSLQHQQMQRQQSSNQVIDLTSSPSPPPSNPSAPHIPQD
SHGPVHAHGMLNLPPKTPVCIGQLTVTALVLYPISYLQHQIPYSEGIPCADWASVRLQHD
PMAKQRSPNGEETIHIKTPPTRIPTGEVLPGENFGVVEQKVATALGPMLGKGLIRIDAKV
RRGVPNLPILPLQMLIHTPNGNIPIVARYLQQSGLLLDHPTDVWDQTRLEALHYLNPHNP
PPGGHARTFNIGSSRIGQAGLGGGGWSSPAVSGKSVEVQRSQVDEVFKNMRSEDELEETE
PGSDIATKLYPHQKKALTFLLEREREISGPGGRSSSLWQSRTNNHFSSKSWVNLVTRKEV
FTEPTDCKGALLADDMGLGKTITCVSLIALTLPAARTFAQQPLPQLPRPPLEQRNSDSAV
SVSHFAGSVWGMPDVSVQPSSLSAKKKAQVQREQDKFETLYSRARRIKVRSRATLVVCPL
STVVNWEDQFREHWAGEVQIVGGAGTGCNSTTCLVQTTSDMTLNSQSCCDTDGRIEGKGN
VRNGEETQVANGHMPGSVDKPTRGTPLRVYIYHGNARRPDPNFLADFDAVITTYATLASE
FSKQTKSISVQDDEDDEVSGEGANDVSGAEFDESGNQVIQIPKAKEKKSLKRKKQQALFS
GVVEATSALQSIYWFRVVLDEAHSIKETSTVASRASCDLEADRRLCLTGTPVQNKLDDVF
ALIKFLRLNPFDDKNVWQEFIGVPVKFGQPVGVARLQIVMKSITLRRTKETKAEDGTSIL
SLPPRRDELRLLKFDEQEQRIYDEFFKESRDEFKELSHKNEVMKNYVGILQKILRLRQIC
DHYELVEGKDLQESVHNFEDLVTAIARDGIDIARASAVFSIIRDAGTAQCVECGCELGTP
ADIAQVGLEDESASGSKRGRKSKASSRVPTRQSSPVIYRPILSRCQHLFCIACFQNSIFP
GWPNIPDDSPRSCSACQTALRPTDAVEVSPDCSIGDLSAKKKPTKKEKRQKGVDLEKFHP
STKVKALLGDLITFSRMNPYSPNYDPSSIEIQMVDEKGNDIDDNIVKTVVFSQWTSMLDK
VEDALEAAGIRYERLDGTMRRDERTRAMDILKNDPGCEVLLVSLKAGGVGLNLTAAQRVY
LMDPYWNPAVENQAVDRIHRLGQRKPVTTVKLIIENTIEARLLEVQKKKTELANMTLGTH
LSKAEVQQRRMEELNQLFHG
NT seq 4023 nt   +upstreamnt  +downstreamnt
atggcgacccactctgagacgcatccatctgcatcttcttcttctttctttgcaccttac
tcgcgttccaatccgattgacctcacgctggatgatgatcctcaagcacggccgaggcac
acgaaacggcaacgcatggactttgatttagacagcaatccgtcttccactgcgtcttct
ccttctattagatcgccttcgccttcggtgtcttcaaagcctgtgctttcgcggtatcca
gccgctctccacgtgcagtccacccgccccgactacttgtcgcacatcgttcaacctcag
ggcgcatatagaccacacttttctggtccctcagactcgtcagcattcttcccgaaccgg
aatatacaaacaagcaatgtacggaccccgtctttgtccgggttaaacctcagtaatggt
gcgcaatcacttcaacaccagcagatgcaacgtcaacaatcttccaatcaagtcattgat
cttacctcctctccttctccgcctccctcaaatccttccgcgccacatatcccccaggac
tcacatggaccagttcatgctcatggcatgcttaatctgccgccgaagactcctgtctgt
ataggacagctgactgttacggcgcttgttctttatcctatctcttatttgcaacatcag
atcccctactcggagggcataccatgcgctgattgggcatcagtgcgccttcagcatgat
ccaatggctaagcagcgtagtcctaatggcgaagagaccatccatatcaagacaccacct
actaggattcctactggtgaggtcctgcctggcgaaaatttcggtgtcgtcgaacagaag
gtagccacagcgctggggcctatgttgggaaagggattaattagaatagatgcgaaagtc
agaaggggtgttccaaatcttcctattttaccattacagatgctaatccataccccgaat
ggcaacatccctatcgttgcgcgctatctgcagcaatcgggcctccttcttgaccatcct
accgacgtttgggaccagactcgtctagaagcactgcattatttgaatccgcataatcct
cctcctgggggtcacgcgcgtaccttcaacatcggatcatcaaggatagggcaagcaggg
ttagggggaggcggatggagtagtccggctgtttcaggtaagagcgtagaagtgcaaagg
agtcaggtggacgaagtgtttaaaaacatgaggagtgaagacgagttggaagaaaccgaa
cctggctcggatattgctactaaactgtatccccatcagaagaaagcattgacgtttctc
cttgaacgcgaacgagaaatatccggaccgggtggaagatcgtcgtcgctgtggcaatcc
cgtacaaacaatcatttctcctccaaatcttgggtcaatttggtgactcggaaggaggtg
tttacggagcctactgactgcaagggcgctctgctagctgacgacatgggattaggaaag
acaattacctgcgtatctcttatcgcactcaccctacccgccgctcgcacgtttgcacag
caaccattgccgcaacttcctagacctccgcttgagcagaggaactcagattccgcagtt
tctgtgtcgcatttcgcagggagcgtctggggaatgcctgatgtatctgtacaaccaagc
tcactttctgcgaagaagaaggcgcaagttcagagggaacaagacaaattcgagaccctg
tactccagagcgcggagaataaaggttcgaagtagggcaacgctagttgtttgcccttta
tccactgttgtcaactgggaggatcagtttcgggagcattgggccggcgaagtacaaatt
gtgggcggtgcaggaacgggttgcaactcgactacttgcttggtccaaacgacgtcagac
atgacactcaattcccagtcttgctgtgatactgacggccggatagaggggaaaggaaat
gtccgcaatggcgaggaaacgcaagtggccaacggtcatatgccaggttctgtggataaa
ccaactcgaggtacacctttaagggtgtatatatatcatgggaatgctcgacgtcctgat
cctaattttcttgcggatttcgatgcggttatcacgacgtatgcgacactcgcttcagag
ttctcaaaacaaacaaaaagtatttctgttcaagacgatgaggacgacgaagtaagcgga
gaaggtgccaatgacgtctctggagccgagtttgacgaaagtgggaatcaagtcatacag
attccaaaagccaaagaaaagaagagcttgaagaggaagaaacaacaagcgttgttttct
ggtgtcgttgaggcgacaagtgctcttcagagtatctactggtttagagtcgttcttgat
gaagcacactcgatcaaggaaacatcgaccgtcgcgagtcgtgcgtcatgcgatttggaa
gccgatcgcaggctatgcctcactggaacacctgtgcagaacaagctcgatgacgttttc
gcactaatcaaatttttgcgtcttaacccttttgacgacaagaatgtttggcaggagttc
atcggcgtccctgtcaaatttggacagccggttggagttgcacgcctacaaattgtgatg
aaatctattactcttcgaaggaccaaggagacgaaggctgaagatggaacgtcaatcctg
tctcttccacctcgtcgcgacgaacttcgtcttctcaagttcgacgagcaggagcaacga
atttacgatgaattctttaaggagtcaagggatgaattcaaggaactttctcacaaaaat
gaggtaatgaagaattacgtcggaattcttcaaaagattctgcgtcttcgtcaaatatgc
gaccactacgagctggtcgagggtaaggacctacaggagtctgtccataattttgaagat
ttagtcacagccatcgcaagagatggtattgacatagcgcgagcaagcgctgttttcagt
attatccgcgatgccggtactgctcaatgtgtagaatgcggttgcgagttgggaacgcct
gcagacattgcgcaggtcggcttggaagatgagtctgcctcaggaagtaaacgaggacga
aaatcgaaagcatcatcccgcgtaccaacacgacaaagtagcccggtcatatatcgtcca
atactctcccgttgtcagcatctattctgcattgcctgcttccagaacagtatctttcca
ggctggccaaatattccagatgattctccccgatcatgttcggcatgccagacagcttta
aggccaacagacgctgtggaggtcagtcctgactgctcgataggtgatttgtcagcaaag
aagaaaccaacgaaaaaggagaaacgtcagaaaggtgtggatcttgagaagttccatcca
tcaacaaaagtgaaggctttactcggggacttgatcaccttctcacgtatgaatccgtac
tcgcccaattacgatccttcttcaatcgagatccagatggtagacgagaaaggcaatgat
atcgacgacaacatcgtcaagacagtcgtattttcccagtggacgtcaatgctagacaaa
gttgaagatgctctggaagcagctggaattcgttacgagcgcctcgatggtaccatgaga
cgggacgaacgtacccgagctatggatatcttgaaaaatgaccccggttgtgaagttttg
cttgtcagtctaaaggctggtggtgtcggtctgaacctaaccgccgctcagcgcgtatat
ttaatggatccatactggaatcctgcggtagaaaaccaggcagttgatcgtattcatcga
ctcggacagaggaaacctgtcacaaccgtaaaactcatcattgagaacacgattgaggcg
cgactactggaagtacaaaagaagaaaaccgaactcgcgaatatgacgcttggcacccat
cttagcaaggcagaagtccagcaacgacgcatggaagaacttaatcagcttttccacggc
taa

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