Fomitiporia mediterranea: FOMMEDRAFT_19261
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Entry
FOMMEDRAFT_19261 CDS
T03132
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K02974
small subunit ribosomal protein S24e
Organism
fme
Fomitiporia mediterranea
Pathway
fme03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
FOMMEDRAFT_19261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
fme03011
]
FOMMEDRAFT_19261
Ribosome [BR:
fme03011
]
Ribosomal proteins
Eukaryotes
Small subunit
FOMMEDRAFT_19261
Archaea
FOMMEDRAFT_19261
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsrm
Helicase_C
DEAD
HA2_C
AAA_19
HA2_N
nSTAND3
AAA_22
ResIII
ANAPC15
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
18677703
NCBI-ProteinID:
XP_007265555
JGI:
Fomme1_19261
LinkDB
All DBs
Position
Unknown
AA seq
1353 aa
AA seq
DB search
MPFNSTRTNPSNYLAARITPQKRSASQAVLPRKDDSRDYKHVRTATQDLPDDMPGPSARD
KAPRGPIRGGRGGRLKADTYRPASGYSRSGHPMKSVGGESRGFSSKAIFSEPFMDEAYIK
QKYADVDIGNVKGSKLSADWQRNPKSALFNFMQTQLGRTAELDVEDGTMDGARMARVKVN
VVDDVVGVGDAGTKRHAEKAACLSACYEIISRGMHIREKAKEKENAPPVETPTQVSLSDG
SQVTYEMARQFMDYYCRKYRFKQPFIELEEMKGRKGSWEAVMTVGGRRIGMAGGKSKKDA
SKACYLDVVTYLEDCDPALWREFVAKAKTGKDLGFASKVYMQMSERLEDDIRDLNWLMKR
SMLFRNAPEAAAAAQAAYVAKSPLSSSGYQNKTLEAKSAKLLRRRKAYLSDPSHEKIRQT
RQNLPVYSKAEDALRQIEENEVIILMAATGSGKTTQIPQLILDSYIDRQEGSRCNIFCTQ
PRRLAAISVAQRVAKERGEQVGEGGSIGYQVRFESSLPDENGSVTYCTIGVFLRRMQTAL
QRGHDRVLDNVTHIVVDEVHERDIDTDLLLVVLKRLIEHRRTKGNPLKVILMSATVDATL
FRNYFSDANGTPARVVEIPGRSFPVQKHFLDEFLPSMIQEYRNCRWVFTDEKVVKYIYKE
LPDAARLLPESPALRQVFGKEQREEELEIPYALVGLTISHVLKNSDSGHVLVFLPGWEEI
QSVQKLLTTGESSRLFGLDFGDPSKFSLHVLHSSIPLAEQQVIFDPPPEGVRRIILSTNI
AETSVTIPDVVYVVDTAKIKENRYDPERHISSLVSAWVGKSNLNQRAGRAGRHRPGEYYG
ILSQSRADALHPHQTVEMKRMDLTNVVMHVKALDFPGMEAEEVLARTIEPPSVERVTAAM
ESLKIVGALDEGKKLTSLGRLLLQLPIEVQLGRLVLLGSFFKCLDPALTLAAIFSSRDPF
LSPPTMRKEAQAVKNSWCPEDFRSDAIASLRAFDAWYEFERRGDIRGGAQFCSDNFLSKP
TLMLAVKVKDHLLSSLAQTGILDISNLSTASIGDGHSRRSARSLSVPPELNVNGDSLPLL
AALIAIASQPKFAIRAGPMTYRTAREKTVVMHASSVNHRKRVMDESPVAPREKQLFAYSE
KRQNLSMPGQPPGQMSLVGTTRLDPMTYVLFGAYNIEASDYGLECDEWLPVIGPFDALDD
VRRLKRLMEDCMLRVFEGINNRNWRGARQSKQPLQSSGKYIPPALRQNRDNDEDESGDEE
EDSVGMSHGPLSDMEMRELSRFTQVIVNILDRYAEEQRESQSRRNSRPATPTLTPSMSSR
PLPGSGWRSGASTPLRYDSRPGTPSRLSAKGGW
NT seq
4062 nt
NT seq
+upstream
nt +downstream
nt
atgccgttcaactctactagaacgaacccgtcgaactacttagcagcccgaattacacct
cagaaacgctcagcaagccaggctgtattgcccaggaaagacgattcaagagactataaa
cacgttcgaactgccacacaagacctgccagacgatatgcctggtccttcggcgagagat
aaggctccaagaggccccatacggggtggccgaggtgggcgtttaaaggcggacacatac
cgaccagcgtccggttacagtcgttccggccacccaatgaagagtgtgggcggtgaatcg
agaggattctcgagcaaggctattttctctgaaccattcatggacgaagcttacatcaag
cagaagtatgcggatgtcgatataggaaacgtcaagggatcgaagcttagtgcagattgg
cagaggaatccgaaatctgcgttgttcaacttcatgcaaacgcaacttggccgaactgcc
gaactcgatgttgaggacggaaccatggatggggcgaggatggcaagagttaaagtaaat
gtggtcgatgatgtggttggtgtgggcgacgcaggtaccaagagacatgcggaaaaagca
gcttgtctgtcagcttgctatgagataatatcaaggggaatgcacataagagagaaagcg
aaggagaaggagaacgcgcctccagtagaaacgcctacacaagtttctttatccgatgga
tctcaagtcacctacgaaatggccagacagttcatggactattattgtcggaaatatcgt
ttcaaacagccattcattgagctcgaagagatgaaaggtagaaaaggaagttgggaggct
gtcatgacggtcggaggacgtcggattggaatggctggcggaaagtccaagaaagatgct
tctaaagcttgttacttggatgttgtcacctacctggaggattgcgacccggctctttgg
agggagttcgttgcgaaggcgaagacgggcaaggacttggggtttgcttccaaggtatat
atgcagatgtcggagcgcctggaggatgacatccgcgatctcaactggttgatgaagagg
agcatgctatttcgcaatgcaccagaagcggcggctgcagcacaggctgcatatgtcgct
aaatcgccattatcgagcagtggttatcaaaataaaaccctggaggcaaaatccgcaaaa
ctgttacgtcgtagaaaggcttatctctcggacccttctcacgagaagatacgccaaacg
cgccagaatcttcctgtgtattcgaaggcagaagatgcactgaggcagattgaggaaaat
gaagtgattatcctcatggctgcaactggttcgggaaagacgacgcagatcccgcagcta
atcctcgattcgtatattgacagacaggaaggatctagatgcaatatattttgcactcag
ccacggcgattggctgccatcagtgtggcacaacgtgttgccaaagaacgcggagaacaa
gtcggagaaggaggttcaattgggtatcaggtccgcttcgagtcgtctctacccgatgag
aatggctccgtgacgtactgtaccatcggagtgtttctgaggcgtatgcaaacagccctg
cagcgtggtcatgacagggttctcgataacgtcacacacattgtggtagacgaggttcac
gaacgcgacattgatacggatcttttgttggtcgttctaaagcgattaattgagcatagg
aggacgaagggcaacccgctcaaagtcattcttatgagtgccacagtcgatgccacttta
ttccgaaactacttctcagatgcaaatggcacacctgcgagagtcgtcgagataccaggc
cgttccttccccgtgcagaagcattttcttgacgaattcctgccgtcgatgattcaggag
tacagaaattgtcgatgggtgttcacagacgagaaggtagtaaagtatatctacaaagaa
cttcctgacgctgcccgtcttcttcccgaatcaccagcgctgagacaggtcttcggaaag
gaacaacgagaagaagagctcgaaataccttacgctttagtgggtttgacaatttcgcac
gtcctcaagaactcggactcggggcatgttctcgtattcctaccgggctgggaagaaata
cagagcgtgcagaaattgctgactactggagaatcttctcgacttttcggacttgatttc
ggcgacccttcaaagttttccttacatgttctacactcaagcattcctctggccgagcag
caagtgattttcgatccgcctcctgagggcgtccgtcgcatcatcctctccactaacatc
gccgaaacgtctgtaacgattcccgacgtcgtatatgttgtggacacagctaagattaaa
gaaaaccgatatgatcccgaaagacacatctcatcgctggtttcggcctgggtgggaaaa
tcgaatctcaatcaacgcgctgggcgggctggtcgccacagacctggggaatactatggt
attcttagccagtcacgagccgatgctctgcacccacaccaaactgttgaaatgaaacgg
atggatttgaccaatgttgtcatgcatgtgaaagccttggatttccctggtatggaagca
gaggaggtcctggcaaggacgatcgagccgccttcggtcgaacgcgtcaccgcagccatg
gagagcttaaagatcgttggcgccctggatgaagggaaaaagttaacttctctcggtcgt
ctcctgcttcaacttcctattgaagtacagctcggtcgtcttgtgcttcttggcagcttc
ttcaagtgccttgatccagccctcactttagctgcaattttttctagtcgcgatccgttc
ctttctccacctacaatgagaaaagaagcgcaagccgtgaagaattcatggtgccctgaa
gacttccgatcggatgccatcgcgagtttgagggcgttcgatgcttggtatgagtttgag
aggcgaggtgacattcgaggtggcgcacagttttgcagtgacaacttcctgtcgaagcca
actctgatgttggctgtcaaagtgaaggatcatttactcagttccctggctcagactggt
attttggatatttctaatctttcaaccgccagtattggcgatggccacagtagacgttcg
gctcgatcactctcagtacctcccgaactcaacgttaacggagattcactacccctgtta
gctgcattaattgcaattgccagccaaccgaaattcgcaatcagggcgggtccaatgacc
taccggactgcgagggagaaaacagttgtcatgcatgcttcaagcgttaaccatcggaag
cgtgttatggacgaaagtcctgtcgctcccagggagaagcaactgtttgcctactccgaa
aaacgacagaatttgtctatgcctggtcagcctcccggacagatgtctctggtcggaact
acgcgcctggaccctatgacttacgtgctgttcggtgcatacaacatcgaagcgtctgat
tatggcctggaatgcgatgaatggctaccggtcataggacctttcgatgcattggatgat
gtacgaaggttgaagcgtctaatggaggactgcatgctccgtgtgttcgaaggtatcaac
aatagaaattggcgaggtgcccggcagagtaaacagccactgcagtcctcaggcaaatat
attcctccagcgttgcgccaaaaccgagacaacgacgaagatgagtctggcgatgaggaa
gaggactctgttgggatgtctcatggtccactctcggacatggagatgagggaactaagt
cgattcactcaggtgattgtcaacattttggatagatacgcggaggagcagcgggagagt
cagtctcgtcgtaattctcgccctgctacaccgacgctcacgccttcgatgtcctcaagg
cctctgccagggtctggctggcgatcaggcgcatcaactccgctcagatacgactcccgt
cctggcaccccgagtaggctcagcgcgaaggggggttggtaa
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